Gene Pfl01_4334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4334 
Symbol 
ID3716153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4887623 
End bp4888831 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content63% 
IMG OID 
Productaminotransferase 
Protein accessionYP_350062 
Protein GI77460555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.095923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.699737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC AAGGTTCGCC GCGCCGCTTT GCGCGCATTG ATCGACTCCC CCCTTACGTT 
TTCAACATCA CCGCCGAACT GAAGATGGCC GCGCGACGTC GTGGCGAAGA CATCATCGAC
TTGAGCATGG GCAACCCCGA CGGCGCCACA CCGCCGCACA TCGTTGAAAA ACTGGTGCAG
GTTGCACAAC GCGAAGACAC CCACGGCTAC TCCACGTCCA AGGGCATTCC GCGCCTGCGC
CGGGCGATTT CCAACTGGTA CAAGGAACGC TACGAGGTCG AGATCGACCC GGAAAGCGAA
GCCATCGTCA CCATCGGTTC CAAGGAAGGC TTGGCGCACC TGATGCTGGC GACCCTGGAT
CAGGGCGACA CCGTGCTGGT GCCGAACCCG AGCTACCCGA TTCACATCTA CGGTGCCGTG
ATTGCCGGCG CCCAGGTGCG GTCAGTGCCA CTGGTGCCGG GCGTGGATTT CTTCGCCGAG
CTGGAGCGGG CGATTCGCGG CTCGATCCCG AAACCGAAGA TGATGATCCT CGGCTTCCCG
TCGAACCCGA CCGCGCAGTG CGTGGAGCTC GACTTCTTCG AACGGGTGAT CGCCCTCGCC
AAACAGTACG ACGTGCTGGT GGTGCACGAC CTGGCTTACG CCGACATCGT CTACGACGGC
TGGAAAGCCC CGTCGATCAT GCAGGTGCCG GGCGCCAAGG ACATGGCGGT GGAGTTCTTC
ACCCTGTCCA AGAGCTACAA CATGGCGGGC TGGCGCATCG GCTTCATGGT CGGCAACCCG
GAACTGGTCA GCGCCCTGGC GCGGATCAAG AGCTACCACG ACTACGGCAC CTTCACCCCG
CTGCAGGTGG CCGCGATTGC TGCGCTGGAA GGTGATCAGC AATGCGTGCG CGACATCGCC
GAACAGTATC GCCAGCGCCG CAACGTGCTG GTCAAAGGCC TGCATGAACT GGGCTGGATG
GTCGAGAACC CGAAAGCCTC GATGTACGTG TGGGCGAAGA TTCCCGAAGC CTACGCGCAC
CTCGGCTCGC TGGAGTTCGC CAAGAAGCTG CTGGCCGAGG CCAAGGTCTG CGTCTCGCCA
GGTGTCGGCT TTGGCGAGTA CGGCGACGAT CACGTGCGCT TCGCGCTGAT CGAAAACCAG
GACCGGATTC GCCAGGCGGT ACGCGGGATT CGCGGAATGT TCCGGGCGGA TGCTCTGGGC
ACCAAGTAA
 
Protein sequence
MAEQGSPRRF ARIDRLPPYV FNITAELKMA ARRRGEDIID LSMGNPDGAT PPHIVEKLVQ 
VAQREDTHGY STSKGIPRLR RAISNWYKER YEVEIDPESE AIVTIGSKEG LAHLMLATLD
QGDTVLVPNP SYPIHIYGAV IAGAQVRSVP LVPGVDFFAE LERAIRGSIP KPKMMILGFP
SNPTAQCVEL DFFERVIALA KQYDVLVVHD LAYADIVYDG WKAPSIMQVP GAKDMAVEFF
TLSKSYNMAG WRIGFMVGNP ELVSALARIK SYHDYGTFTP LQVAAIAALE GDQQCVRDIA
EQYRQRRNVL VKGLHELGWM VENPKASMYV WAKIPEAYAH LGSLEFAKKL LAEAKVCVSP
GVGFGEYGDD HVRFALIENQ DRIRQAVRGI RGMFRADALG TK