Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4325 |
Symbol | |
ID | 3716144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4881055 |
End bp | 4881780 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_350053 |
Protein GI | 77460546 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.715564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAGC CATTGATCAT CATCACCGGC GCCAGCTCGG GCATCGGCGA AGCCACCGCC CGCCGCTTGA GCGCGGCCGG CCATCCGCTG CTGTTGCTGG CCCGGCGCAT CGAACGCCTG GAAGCACTGG CCCTGCCGAA CACTCTCAGC CGCCGCGTCG ACATCACCGA CCGCGCCGCA TTGCTGGCCG CTGTTGCCGA GGCGGAAGCG CAGTTCGGTC CGGCCGATGC GCTGATCAAC AACGCCGGGG TGATGCTGCT GGGCGAGATG AGCAAACAGG ATCCGGCGCA GTGGGACCAG ATGCTCGACG TCAACGTGAA AGGTCTGCTC AACGGCGTGC ACGCGGTGGT CGCCGGGATG ATCGAGCGCA AGCACGGCAC GATCATCAAC GTCAGCTCGG TGGCCGGGCG CAAGACCTTC CCCAACCATG TGGCCTATGT CGGGACCAAG TTTGCGGTGC ATGGGCTGTC GGAGAATCTG CGTGAAGAGC TGTCGCCGCA TAACGTGCGG GTGACCACGA TTGCGCCGGG TGCGGTGGAA ACCGAGTTGC TGAGCCACAC CACGGATGAG GCGATCAAGA CCGGTTATCA GGCGTGGAAG CAGGACATGG GTGGCACGGT GTTGAGCGCC GAGGATGTGG CGACGGCGAT TGCCTATGCG TATGGGCAGC CGCAGGGGGT TTGTATTCGC GAGATTGTGA TGGCTGCGAC TCGGCAGCAG GCCTAA
|
Protein sequence | MSKPLIIITG ASSGIGEATA RRLSAAGHPL LLLARRIERL EALALPNTLS RRVDITDRAA LLAAVAEAEA QFGPADALIN NAGVMLLGEM SKQDPAQWDQ MLDVNVKGLL NGVHAVVAGM IERKHGTIIN VSSVAGRKTF PNHVAYVGTK FAVHGLSENL REELSPHNVR VTTIAPGAVE TELLSHTTDE AIKTGYQAWK QDMGGTVLSA EDVATAIAYA YGQPQGVCIR EIVMAATRQQ A
|
| |