Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4321 |
Symbol | |
ID | 3714137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4877909 |
End bp | 4878664 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_350049 |
Protein GI | 77460542 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.255411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCA AAATCGCATT GATCACAGGT GCCAGCCGTG GCCTGGGCAA GAACGCCGCC CTGCACCTCG CCGCGCAAGG CGTGGACATC ATCGGCACCT ACAACAGCCG CGCCGATGAA GCCCAGGCGC TGGTGCAGGA ACTGGAAGCA CTCGGCGCCA ACGCCGTGAT GCTGCAACTG GATGTCGGGC GCAGCGAAGG TTTTGCCGAG TTCGCCGTGC GGGTCGAGCA GGCGCTGCAA CAACTTGAAC GTCCGCGCTT CGATTTCCTG ATCAACAACG CCGGGATTGG CGTGCATGCC TCCTTCGCCG ACACCACGCC GGAACAGTTC GACCTGCTGA TGAACGTGCA GTTGAAAGGG CCGTTCTTCC TGACTCAGCA ATTGCTGCCG CTGATCAACG ATGGCGGGCG GATCATCAAC ATCTCCAGCG GTCTGGCCCG TTTCACCCTG CCGGGTTATG CCGCTTACGC GGCGATGAAA GGCGCGATGG AAGTGCTGAC CCGTTATCAG GCCAAGGAGC TGGGCGCGCG GCAGATCGCC GTGAATATCC TGGCACCGGG GGCCATCGAA ACCGACTTCG GCGGCGGCGC GGTGCGCGAC AATTCGGCAC TGAACGCCAT GGTCGCCAGC AACACCGCCC TGGGCCGTGC CGGGCAGCCG GATGACATTG GTGGCGCACT GGCGCTGCTG CTGTCGCCGG GGGCGCAGTG GATCAACGGT CAGCGGATTG AAGCGTCGGG CGGGATGTTT CTCTAA
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Protein sequence | MNRKIALITG ASRGLGKNAA LHLAAQGVDI IGTYNSRADE AQALVQELEA LGANAVMLQL DVGRSEGFAE FAVRVEQALQ QLERPRFDFL INNAGIGVHA SFADTTPEQF DLLMNVQLKG PFFLTQQLLP LINDGGRIIN ISSGLARFTL PGYAAYAAMK GAMEVLTRYQ AKELGARQIA VNILAPGAIE TDFGGGAVRD NSALNAMVAS NTALGRAGQP DDIGGALALL LSPGAQWING QRIEASGGMF L
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