Gene Pfl01_4321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4321 
Symbol 
ID3714137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4877909 
End bp4878664 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_350049 
Protein GI77460542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.255411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA AAATCGCATT GATCACAGGT GCCAGCCGTG GCCTGGGCAA GAACGCCGCC 
CTGCACCTCG CCGCGCAAGG CGTGGACATC ATCGGCACCT ACAACAGCCG CGCCGATGAA
GCCCAGGCGC TGGTGCAGGA ACTGGAAGCA CTCGGCGCCA ACGCCGTGAT GCTGCAACTG
GATGTCGGGC GCAGCGAAGG TTTTGCCGAG TTCGCCGTGC GGGTCGAGCA GGCGCTGCAA
CAACTTGAAC GTCCGCGCTT CGATTTCCTG ATCAACAACG CCGGGATTGG CGTGCATGCC
TCCTTCGCCG ACACCACGCC GGAACAGTTC GACCTGCTGA TGAACGTGCA GTTGAAAGGG
CCGTTCTTCC TGACTCAGCA ATTGCTGCCG CTGATCAACG ATGGCGGGCG GATCATCAAC
ATCTCCAGCG GTCTGGCCCG TTTCACCCTG CCGGGTTATG CCGCTTACGC GGCGATGAAA
GGCGCGATGG AAGTGCTGAC CCGTTATCAG GCCAAGGAGC TGGGCGCGCG GCAGATCGCC
GTGAATATCC TGGCACCGGG GGCCATCGAA ACCGACTTCG GCGGCGGCGC GGTGCGCGAC
AATTCGGCAC TGAACGCCAT GGTCGCCAGC AACACCGCCC TGGGCCGTGC CGGGCAGCCG
GATGACATTG GTGGCGCACT GGCGCTGCTG CTGTCGCCGG GGGCGCAGTG GATCAACGGT
CAGCGGATTG AAGCGTCGGG CGGGATGTTT CTCTAA
 
Protein sequence
MNRKIALITG ASRGLGKNAA LHLAAQGVDI IGTYNSRADE AQALVQELEA LGANAVMLQL 
DVGRSEGFAE FAVRVEQALQ QLERPRFDFL INNAGIGVHA SFADTTPEQF DLLMNVQLKG
PFFLTQQLLP LINDGGRIIN ISSGLARFTL PGYAAYAAMK GAMEVLTRYQ AKELGARQIA
VNILAPGAIE TDFGGGAVRD NSALNAMVAS NTALGRAGQP DDIGGALALL LSPGAQWING
QRIEASGGMF L