Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4308 |
Symbol | |
ID | 3714124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4865350 |
End bp | 4866669 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | chemotaxis sensory transducer, Pas/Pac sensor |
Protein accession | YP_350036 |
Protein GI | 77460529 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.458128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTTCA ATCGTCACAA GACCGTCCTC GTCGATCTTC AAAACACCAT CAACCAACAA GCCGGCCTGT TGGAAGCGAT CAACCGCTCC ATGGCAGTGA TCGAATTCGA TGTCGACGGT ATCGTTCTGC GCGCCAACGA CAACTTCCTG AAAACCATGG GTTACACCCG CGAACAGGTA GTCGGGCAAC CCCATCGTCA TTTCTGTTCT CCAGAGTTTG CCCGTGGCAA TCAGTACACC GAGTTGTGGT CGCGATTGAA AAGCGGCCAG TTCCAGTCCG GCACCTTTGA ACGCATCGAC AGTCAGGGCC GACCGATCTG GCTCGAAGCC AGCTATAACC CGATCAAGGA TGACTCGGGC CGCGTGGTGA AAGTGGTCAA GTACGCCATG GATGTCACCG CCAAAGTGCA GCAGGAAAGC GAAGCCAATG CGAAATTGCA GGCGATCGAC CGCGCCATGG CGGTGATCGA ATTCGATCTC GACGGCAATA TTCTCACCGC CAATCAGAAT TTCCTGACGC GCATGGGTTA CACCCTTGCC GAACTCAAAG GCAAACATCA CCGCTTGTTC TGCCCCGCGC AACTGGTCAA CAGCAGCGCC TACCAGGATT TCTGGCGCCG GTTGAATCAG GGCGAACTGT TTCAGGGCCA GTTCGAACGC GTCGACAAAC GTGGTCAGAC CGTATGGCTG GAAGCCAATT ACAACCCGGT CTACGACGCC GCCGGCCGCT TGTGCAAAGT GGTGAAGTTC GCGTCGGACG TGACCGCCCG GGTCGAACAG CACGAGCAGG ATGCGCGCAG TGCCAGCGCG GCCTATCACA TCTCGGTGGC CACCCGAAAA GTCGCCGAGC AAGGTACGCA AGTGATTCAG CAAGCCGCCA GTGAAATGCG CGAGATTGCC GACGACATTG CCGAATCCTC AACCCTCATC GCGCAGCTCG GCGAACGCTC CGAGCAGATC ACTGCCATCG TCAACACCAT CCGCGCGATT GCCGATCAGA CCAATCTTTT GGCCCTGAAC GCTGCAATCG AAGCCGCCCG AGCCGGTGAG CAGGGTCGCG GTTTTGCCGT GGTGGCCGAT GAAGTGCGGC AGCTGGCAGC GCGCACCAGC GGCTCCACTG CGGAAATTTC CAACATGATC AGCCTGATCC AGACCGAAAC CCGTCAGGCG ATCAAGAGCA TGGACGGCAC CCGAGGGCGT GCGGCGCAAG GTGTGGAGCT GGCGGATCAG GCCGGTACGG TGATTCTGCA GATTCGGGAC GGCGCCAGCG AGGCGGTGGA AGCGGTGAGC ATGTTTGCCA ACGAGCGTGC GCCGGGATAA
|
Protein sequence | MIFNRHKTVL VDLQNTINQQ AGLLEAINRS MAVIEFDVDG IVLRANDNFL KTMGYTREQV VGQPHRHFCS PEFARGNQYT ELWSRLKSGQ FQSGTFERID SQGRPIWLEA SYNPIKDDSG RVVKVVKYAM DVTAKVQQES EANAKLQAID RAMAVIEFDL DGNILTANQN FLTRMGYTLA ELKGKHHRLF CPAQLVNSSA YQDFWRRLNQ GELFQGQFER VDKRGQTVWL EANYNPVYDA AGRLCKVVKF ASDVTARVEQ HEQDARSASA AYHISVATRK VAEQGTQVIQ QAASEMREIA DDIAESSTLI AQLGERSEQI TAIVNTIRAI ADQTNLLALN AAIEAARAGE QGRGFAVVAD EVRQLAARTS GSTAEISNMI SLIQTETRQA IKSMDGTRGR AAQGVELADQ AGTVILQIRD GASEAVEAVS MFANERAPG
|
| |