Gene Pfl01_4295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4295 
Symbol 
ID3713993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4852604 
End bp4853854 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content59% 
IMG OID 
Productribonucleotide-diphosphate reductase subunit beta 
Protein accessionYP_350023 
Protein GI77460516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.706948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.958774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCT GGGACGAATT CGACAAAGAA GACAGTGAAG TAGCAGCAGT GAAAGGCGCC 
AACGCCGGCC ACGCTAGCGA AGCCAACATG GACCGCCTCG ACAGCGCCGG CGGTGCCGCC
GCCCTCGAAG CCCGCGCCGT GACCGCCGAA GACTCGGCCG CCGTGGCCCG CGCCAAGGCT
GCACTGGATT CCCTCGACGT CGCCGAAGGC CTCGCCGAAC TCGAAGGCTC CGCCGCCCGT
GTCGCCGTTG ACGAAAAGCG CATGATCAAC TGCCGCGCCG ACCTCAACCA GCTCGTGCCA
TTCAAGTACG ACTGGGCCTG GCAGAAATAC CTGGACGGCT GCGCAAACCA CTGGATGCCG
CAAGAAGTCA ACATGACCGC CGACATCGCC CTCTGGAAAA ACCCGGAAGG CCTGACCGAC
GACGAGCGCC GCATCGTGAT GCGCAACCTC GGCTTCTTCT CCACCGCCGA CTCCCTGGTT
GCCAACAACC TGGCCCTGGC CGTGTACCGC CTGATCACCA ACCCGGAATG CCGCCAGTAC
ATCCTGCGCC AGGCCTTCGA AGAGGCGATC CACACCCACG CCTACCAGTA CTGCATCGAA
TCGCTGGGCA TGGATGAAGG CGAGATCTTC AACATGTACC ACGAGATCCC GTCGGTCGCG
AAAAAAGCCG CCTGGGGCCT GAAATACACC CGCGCCATCT CCGACCCGGA ATTCAACACC
GGCACCGTAG AGACCGACAA AGAACTGCTG CGCAACCTGA TCGCCTACTA CTGCGTTCTG
GAAGGCATCT TCTTCTACTG CGGCTTCACC CAGATCCTCT CCATGGGCCG CCGCAACAAA
ATGACCGGCG TCGCCGAGCA GTTCCAGTAC ATCCTGCGCG ACGAATCCAT GCACCTGAAC
TTCGGCATCG ACGTGATCAA CCAGATCAAA ATCGAAAACC CACACCTGTG GGATGCTGAA
ATGAAGGAAG AAGCTTCGCA GATGATCCTG CAAGGCACTC AGCTGGAAAT CGAATACGCG
CGTGACACCA TGCCTCGCGG CGTACTGGGC ATGAACGCGG CGATGATGGA GGACTACCTG
AAGTTCATCG CTAACCGTCG TCTGTCGCAG ATCGGTTTGA AGGAAGAGTA CCCAGGGACG
ACTAACCCGT TCCCTTGGAT GAGCGAGATT ATGGACTTGA AGAAAGAGAA GAATTTCTTT
GAGACTCGTG TGATCGAATA CCAAACTGGT GGTGCTCTGA GCTGGGACTA A
 
Protein sequence
MLSWDEFDKE DSEVAAVKGA NAGHASEANM DRLDSAGGAA ALEARAVTAE DSAAVARAKA 
ALDSLDVAEG LAELEGSAAR VAVDEKRMIN CRADLNQLVP FKYDWAWQKY LDGCANHWMP
QEVNMTADIA LWKNPEGLTD DERRIVMRNL GFFSTADSLV ANNLALAVYR LITNPECRQY
ILRQAFEEAI HTHAYQYCIE SLGMDEGEIF NMYHEIPSVA KKAAWGLKYT RAISDPEFNT
GTVETDKELL RNLIAYYCVL EGIFFYCGFT QILSMGRRNK MTGVAEQFQY ILRDESMHLN
FGIDVINQIK IENPHLWDAE MKEEASQMIL QGTQLEIEYA RDTMPRGVLG MNAAMMEDYL
KFIANRRLSQ IGLKEEYPGT TNPFPWMSEI MDLKKEKNFF ETRVIEYQTG GALSWD