Gene Pfl01_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4290 
Symbol 
ID3713988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4846573 
End bp4847271 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content63% 
IMG OID 
Productamino acid ABC transporter permease 
Protein accessionYP_350018 
Protein GI77460511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTCG ACTACAACGT CATTTGGGAG GCCCTGCCGC TGTACTTCGG CGGTCTGGTC 
ACGACCCTCA AGTTGCTCGC GCTGTCGCTG TTCTTCGGTC TGCTCGCGGC CCTGCCGCTG
GGGCTGATGC GCGTATCCAA GAACGCTGTG GTCAATGGCG CAGCCTGGCT CTACACCTAC
GTGATTCGCG GCACGCCGAT GCTGGTTCAA CTGTTCCTGA TCTACTACGG TCTGGCCCAG
TTCGAAGCGG TGCGCGAGAG CTTCCTCTGG CCGTGGCTGT CCAGCGCAAC GTTCTGTGCG
TGCCTGGCGT TCGCGATCAA CACCAGCGCC TACACCGCCG AAATCATCGC CGGCAGCCTG
AAGGCCACGC CGAACGGCGA GATCGAAGCG GCCAAGGCCA TGGGCATGTC GCGCGTCAAG
ATGTACAAGC GCATCCTGCT GCCATCGGCC CTGCGCCGGG CGCTGCCGCA GTACAGCAAC
GAAGTGATCA TGATGCTGCA GACCACCAGT CTGGCGTCCA TCGTGACCCT GATCGACATC
ACCGGCGCGG CCCGCACCGT CAACGCGCAG TTCTACCTGC CGTTCGAGGC GTACATCACC
GCCGGCGTGT TCTACCTGTG CCTGACCTTC ATTCTGGTGC GCCTGTTCAA GCTGGCCGAG
CGTCGCTGGC TGAGCTACCT GGCCCCGAGG AAGCACTGA
 
Protein sequence
MIFDYNVIWE ALPLYFGGLV TTLKLLALSL FFGLLAALPL GLMRVSKNAV VNGAAWLYTY 
VIRGTPMLVQ LFLIYYGLAQ FEAVRESFLW PWLSSATFCA CLAFAINTSA YTAEIIAGSL
KATPNGEIEA AKAMGMSRVK MYKRILLPSA LRRALPQYSN EVIMMLQTTS LASIVTLIDI
TGAARTVNAQ FYLPFEAYIT AGVFYLCLTF ILVRLFKLAE RRWLSYLAPR KH