Gene Pfl01_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4279 
Symbol 
ID3712891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4827686 
End bp4828696 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content61% 
IMG OID 
Productsuccinylglutamate desuccinylase 
Protein accessionYP_350007 
Protein GI77460500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCC TCGGCAAACT GCTTGAACTG ACCCTCGCCG GCCGTGAACC GGCGGAGAAG 
ACTCAACTGA CTGTCGAAGG CGTGCGCATG CGCTGGTTGA GCGAGGGTGC GCTGGAAGTC
CGGCCACCCG AAGCGCGCGA CAATGGCCTG GACCTGCTGC TGTCTGCAGG CATCCACGGC
AACGAAACGG CACCGATCGA ATTGCTCGAC CGGTTGCTGC ATGACATCGC CCGCGGCGAT
CTGAAGCCGC GCGCACGCAT TCTGTTCCTG TTCGGCAACC CGGAAGCGAT TCGCAAGGGC
GAGCGTTTCG TCGAGCAGGA CGTCAATCGG CTGTTCAACG GCCGTCACGA ACAAAGCAGC
GGTTCCGAAG CCCTGCGTGC CTGCGAGCTG GAACGTCTGG CGGCGAGTTT CTTCAGTCTT
CCTGATCGTC AGCGCCTGCA CTACGACCTG CACACCGCGA TTCGCGGTTC GAAGATCGAG
CAGTTCGCCC TTTATCCGTG GAAGGAAGGT CGCCAGCATT CCCGTCTTGA GCTGGCCCGC
CTGCGCGCCG CCGGCATGGA GGCGGTGCTG TTGCAGAACA AGCCGTCGAT CGTGTTCAGC
TCTTACACCT ACGACAAGCT GGGGGCCGAG TCCTTCACGC TGGAACTGGG CAAGGCGCGG
CCATTCGGGC AGAACGCCGG GGTCAATGTG TCGCTGTTGG AAACCCGCCT GAAGCAGATC
ATCGAAGGCA CCGAACCAGA GATGGCCGAG CAAGGCCTGG ATGGTCTGCA ACTGTTCAGC
GTGGCTCGGG AAATCATCAA GCACAGCGAT GCGTTCCGCC TGAACCTGCC GGCGGACATC
GAAAACTTTT CCGAACTGGA TGTGGGTTAT GTGCTGGCCG AAGACCTGGC CAATACCCGC
TGGATCATCG AAGAGCAGGG CGCGCGGATC ATCTTCCCCA ACCCCAAGGT CAAGAACGGC
CTGCGGGCGG GTATTCTGAT CGTGCCGACC ACTGACGAAA ATCTTGCCTG A
 
Protein sequence
MLALGKLLEL TLAGREPAEK TQLTVEGVRM RWLSEGALEV RPPEARDNGL DLLLSAGIHG 
NETAPIELLD RLLHDIARGD LKPRARILFL FGNPEAIRKG ERFVEQDVNR LFNGRHEQSS
GSEALRACEL ERLAASFFSL PDRQRLHYDL HTAIRGSKIE QFALYPWKEG RQHSRLELAR
LRAAGMEAVL LQNKPSIVFS SYTYDKLGAE SFTLELGKAR PFGQNAGVNV SLLETRLKQI
IEGTEPEMAE QGLDGLQLFS VAREIIKHSD AFRLNLPADI ENFSELDVGY VLAEDLANTR
WIIEEQGARI IFPNPKVKNG LRAGILIVPT TDENLA