Gene Pfl01_4276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4276 
Symbol 
ID3712888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4825654 
End bp4826658 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content63% 
IMG OID 
ProductL-threonine aldolase 
Protein accessionYP_350004 
Protein GI77460497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTA TCGATCTTCG CAGCGACACC GTCACTCAAC CGACTCCCGC CATGCTCGAC 
GCGATGACCC GCGCCGACAC CGGTGACGAC GTGTATGGCG AAGATCCGAC GGTCAATCGT
CTGGAAGCCG AACTGGCAAA ACGGCTCGGT TTTGCTGCCG CGCTGTTCGT CCCGACCGGC
ACCATGAGCA ACCTGCTGGG CTTGATGGCG CACTGCGAGC GCGGTGACGA GTACATCGTC
GGTCAACAGG CACACACCTA TAAATACGAA GGCGGCGGCG CAGCGGTGCT CGGCTCGATT
CAGCCACAGC CGCTGGAAGT GCAGGCCGAC GGCTCGCTGG ACCTGGATCA GGTGGCCGCG
GCGATCAAGC CCGACGATTT CCACTTCGCC CGCACCCGCC TGCTGGCGCT GGAAAACACC
ATGCAGGGCA AAGTGTTGCC GCTGGACTAT CTGGCCCGGG CCCGCCAGTT CACTCGGGAC
AACGGCCTGC AACTGCATCT GGACGGCGCG CGGCTGTACA ACGCGGCGGT CAAGCTGGGG
GTCGATGCCC GGGAAATCAC CCAATATTTC GATTCGGTCT CGGTGTGCCT GTCCAAAGGC
CTCGGCGCGC CGGTCGGTTC GGTGCTGTGC GGTTCGTCGG CGTTGATTGC AAAGGCCCGG
CGCCTGCGCA AAATGGTCGG TGGCGGCATG CGTCAGGCCG GACTGCTGGC GGCGGCGGGG
CTGTATGCGC TGGATCACAA CGTGGAGCGT CTTGCCGATG ACCATGCCAA CGCACAGTTG
CTGGCCGAAG GCTTGCGCGA GGCCGGTTTC AGTGTCGAGC CGGTGCAGAC CAACATGGTT
TACGTGCAGA TGGGCGACCG TGCCGAGGCG ATCAAGGCAT TTGCCGCCGA ACGCGGGATC
AAGTTGAGCG CTGCCGCCCG TCTGCGGATG GTCACGCACA TGGACGTCAA TCGCTCGCAA
ATCGAGCAAG TGATCGCGAC ATTCGTCGAG TTTTCGCGCA AGTGA
 
Protein sequence
MSVIDLRSDT VTQPTPAMLD AMTRADTGDD VYGEDPTVNR LEAELAKRLG FAAALFVPTG 
TMSNLLGLMA HCERGDEYIV GQQAHTYKYE GGGAAVLGSI QPQPLEVQAD GSLDLDQVAA
AIKPDDFHFA RTRLLALENT MQGKVLPLDY LARARQFTRD NGLQLHLDGA RLYNAAVKLG
VDAREITQYF DSVSVCLSKG LGAPVGSVLC GSSALIAKAR RLRKMVGGGM RQAGLLAAAG
LYALDHNVER LADDHANAQL LAEGLREAGF SVEPVQTNMV YVQMGDRAEA IKAFAAERGI
KLSAAARLRM VTHMDVNRSQ IEQVIATFVE FSRK