| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4275 |
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| Symbol | alaS |
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| ID | 3712887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 4822883 |
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| End bp | 4825507 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_350003 |
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| Protein GI | 77460496 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0551773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCG CAGAAATCCG TGAAGCCTTC CTTCGCTTCT TCGAAGAGCA AGGCCACACC
CGTGTAGCCT CCAGCTCTTT GATTCCGGGC AACGACCCAA CCCTGCTGTT CACCAACGCG
GGGATGAACC AGTTCAAGGA CTGCTTCCTG GGCCAGGAAA AGCGCGCGTA CACCCGCGCC
GTCTCCAGCC AGAAATGCGT GCGCGCCGGC GGCAAGCACA ATGACCTGGA AAACGTCGGT
TACACCGCCC GTCACCACAC CTTCTTCGAA ATGCTGGGTA ACTTCAGCTT TGGCGACTAC
TTCAAGCGTG ATGCCATCAC CTACGCCTGG AACTTCCTGA CCTCCGAGAA GTGGCTGAAC
CTGCCGAAGG AAAAACTGTG GGTCACCGTC TACGCCAGCG ATGACGAGGC CTACGACATC
TGGACCAAGG AGGTCGGTGT GCCGGCCGAG CGCATGGTGC GCATCGGCGA CAACAAGGGC
GCGCCATACG CCTCCGACAA CTTCTGGACC ATGGGTGATA CCGGCCCGTG CGGTCCTTGC
ACCGAGATTT TCTACGATCA CGGCGCCGAC ATCTGGGGCG GCCCACCGGG CTCGCCGGAA
GAAGACGGCG ACCGTTACAT CGAAATCTGG AACAACGTAT TCATGCAGTT CAACCGCACC
GCCGATGGCG TGTTGCACCC GCTGCCAGCC CCGTCGGTGG ACACCGGCAT GGGTCTTGAG
CGGATCAGTG CCGTGCTGCA GCACGTTCAC TCGAACTATG AAATCGACCT GTTCCAGAGC
CTGCTGGCCG CATCGGCCAA GGCGATCGGC TGCACCAACG ACGCTCAGGC ATCGCTGAAA
GTCGTGGCTG ACCACATCCG TTCCTGCGGC TTCCTGATTG CCGACGGCGT GTTGCCGTCC
AACGAGGGTC GCGGTTATGT GCTGCGCCGG ATCATCCGTC GCGCCTGCCG TCACGGCAAC
AAGCTGGGCG CCAAGGGCAG CTTCTTCTAC CTGATCGTTG CCGCACTCGT GGCCGAGATG
GGCGAAGCGT TCCCGGAGCT GAAATCCCAG CAGGCGCACA TCGAGCGCGT ACTGAAAGCC
GAAGAAGAAC AGTTCGCCAA GACCCTGGAG CAGGGCCTGA AAATCCTCGA GCAGGATCTG
GCCGAGCTCA AAGGCGACGT GGTGCCGGGC GACGTGGTGT TCAAACTCTA CGACACCTAC
GGTTTCCCGA TGGACCTGAC CGCGGACATC GCCCGCGAGC GTAGCCTGAC CATCGACGAA
GCCGGTTTCG AGCGTGAAAT GGAAGCCCAG CGCGTCCGTG CACGTTCCGC CAGCTCGTTC
GGTCTGGACT ACAACAGCCT GGTCAAGGTT GACGTCGATA CCGAGTTCAC CGGTTATCAC
GCCACCAGCG GTTCGGCGAA AGTCGTTGCT CTCTATAAAG ATGGCCAGTC CGTGGACGTC
TTGAGTGAAG GGCAGGAAGG CGTTGTGGTT CTGAACCAGA CCCCTTTCTA CGCCGAATCC
GGCGGCCAGG TCGGCGATTG CGGTTACCTG CAGGCCGGCA ACAGCCGTTT CGACGTGCGC
GACACCACCA AGACCGGTGG CGCGTTCCTG CACCACGGCG TACTGGCGTC GGGCAGCCTG
ATCGTTGGCG CACCGGTGGA AACCCACGTC GAAGCCGACG TGCGTCACGC TACTTCGCTG
AACCACTCGG CCACTCACTT GCTGCACGCT GCATTGCGCA AAGTGCTGGG CGACCACGTT
CAACAGAAAG GTTCGTTGGT CGACAGTCAG CGCCTGCGTT TCGACTTCAG CCACTTTGAA
GCGATCAAGC CGGAGCAGAT CAAGGCACTG GAAGACATCG TCAACGCCGA GATCCGCAAG
AACTCCGCCG TTGAAACCGA AGAAACCGAC ATCGAAACCG CCAAGCAGAA AGGCGCGATG
GCGCTGTTCG GCGAGAAGTA CGGCGACAAC GTGCGCGTGC TGAGCATGGG CGGTGATTTC
TCCGTCGAGC TGTGCGGCGG TATCCATGCC AACCGTACCG GTGACATCGG TCTGCTGAAA
ATCATCAGCG AAGGCGGTGT GGCATCGGGT GTGCGTCGTA TCGAAGCGGT CACCGGCGCT
GCGGCGCTGG CTTACTTGAA CGCTGCTGAA GAACAACTCA AGGAAGCGGC CAGCCTGGTC
AAGGGCAGCC GCGACAACCT GATCGACAAG CTGTCGGCGG TGCTGGAGCG CAACCGTGCG
CTTGAAAAGC AGCTCGAGCA GTTGCAGGCC AAGGCCGCTG CTGCCGCGGG CGACGATCTG
TCGGCCTCGG CCGTGGACGT CAAGGGCGTG AAAGTGCTGG CCGTGCGTCT GGATGGTCAG
GACGGCAAGG CGCTGCTGGC GCTGGTCGAT CAGCTGAAAA ACAAACTCGG CCGCGCAGTG
ATCCTGCTCG GCAGTGTCCA TGAGGAAAAG GTCGTACTGG TCGCAGGCGT GACCAAGGAC
CTGACTGGCC AACTCAAAGC CGGTGATTTG ATGAAGCAGG CTGCTGCGGC AGTGGGCGGG
AAGGGCGGTG GTCGTCCGGA CATGGCGCAG GGCGGCGGTG TCGACGCCGG CGCACTGGAT
GGCGCACTGG CGCTGACCGT TCCATTCGTC GAGCAGGGTT TATAA
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| Protein sequence | MKSAEIREAF LRFFEEQGHT RVASSSLIPG NDPTLLFTNA GMNQFKDCFL GQEKRAYTRA
VSSQKCVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKRDAITYAW NFLTSEKWLN
LPKEKLWVTV YASDDEAYDI WTKEVGVPAE RMVRIGDNKG APYASDNFWT MGDTGPCGPC
TEIFYDHGAD IWGGPPGSPE EDGDRYIEIW NNVFMQFNRT ADGVLHPLPA PSVDTGMGLE
RISAVLQHVH SNYEIDLFQS LLAASAKAIG CTNDAQASLK VVADHIRSCG FLIADGVLPS
NEGRGYVLRR IIRRACRHGN KLGAKGSFFY LIVAALVAEM GEAFPELKSQ QAHIERVLKA
EEEQFAKTLE QGLKILEQDL AELKGDVVPG DVVFKLYDTY GFPMDLTADI ARERSLTIDE
AGFEREMEAQ RVRARSASSF GLDYNSLVKV DVDTEFTGYH ATSGSAKVVA LYKDGQSVDV
LSEGQEGVVV LNQTPFYAES GGQVGDCGYL QAGNSRFDVR DTTKTGGAFL HHGVLASGSL
IVGAPVETHV EADVRHATSL NHSATHLLHA ALRKVLGDHV QQKGSLVDSQ RLRFDFSHFE
AIKPEQIKAL EDIVNAEIRK NSAVETEETD IETAKQKGAM ALFGEKYGDN VRVLSMGGDF
SVELCGGIHA NRTGDIGLLK IISEGGVASG VRRIEAVTGA AALAYLNAAE EQLKEAASLV
KGSRDNLIDK LSAVLERNRA LEKQLEQLQA KAAAAAGDDL SASAVDVKGV KVLAVRLDGQ
DGKALLALVD QLKNKLGRAV ILLGSVHEEK VVLVAGVTKD LTGQLKAGDL MKQAAAAVGG
KGGGRPDMAQ GGGVDAGALD GALALTVPFV EQGL
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