| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4247 |
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| Symbol | |
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| ID | 3717825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 4791841 |
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| End bp | 4795482 |
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| Gene Length | 3642 bp |
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| Protein Length | 1213 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_349975 |
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| Protein GI | 77460468 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.803937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTTA TAAACGGAAC ATCGGGTACG GACACATTGG TAGGCACGTC AAGTGCGGAT
GAGTTATTTG GGTTTGCAGG GAACGACTCG TTGAGTGGTG GCGAGGGTAA CGACCTGCTG
GATGGCGGGG CTGGTGCGGA CATCTTGAAT GGCGGGAACG GTATCGATAC CGCGTCCTAT
GCCAACTCGA CAGCTGGGGT TACGGTCAAT CTGGCTACCG GAACAGGTGT TGGCGCAGAC
GCCCAGGGGG ATACGCTGAC CTCCATTGAG GCAGTGATCG GCTCGTCCTT CAATGACGTT
CTGACCGCGC AAACTTCAGG CAATACCCTG AACGGTGGTG CTGGCGATGA CATCTACTAC
ATCAACGGCT CCGGAGTGAA TGTCATCGAA GCCGCGGGTG GCGGTGATGA CGAAGTACGC
ACAATCCTGC TTAACCATTC GCTGGCGGCC AACGTCGAAC GCCTGACCTA CGTCGGCACC
GGTAGCTTCA CCGGTTACGG CAACGCCTTG GACAACGTCA TTACCGGTGG TGTCGGTAAC
GACTACTTGT TTGGCGGAGC GGGCGCTGAC CGGTTCATTG GTGGCGCTGG CAACGACACC
GTGAGCTATG GCGACAGCGG AGTCGGGGTG ACGATCAACA CCAAGACCGG TGTGAACACC
GGTATCGCCG CAGGCGATAC GTATGTGGGG ATCGAAGCAC TTCAGGGCTC AGGTAGCAAC
GACACCTTTA TCAGTGGTGA AGCGGCGGAT CAGTTCTACG GTTCGGGCGG TACCGACACC
ATTGATTATT CCGGCTCGTC CAGCGGCGTG ACGGTGAGCC TGGTCGGCGG CGTTGCGGGT
GTGGGTGGTG ATGCTCAGGG CGACAAGCTG TGGGAGTTCG AAACTGTCAT CGGCTCGTCC
TTCAATGACG TTCTGACCGC GCAAACTTCA GGCAATACCC TGAACGGTGG TGCTGGCGAT
GACATCTACT ACATCAACGG CTCCGGAGTG AATGTCATCG AAGCCGCGGG TGGCGGTGAT
GACGAAGTGC GCACGATCAT GCTCAACCAG ACACTGGCGG CCAACGTCGA GCGCCTGACC
TACGTCGGCA CCGGTAGCTT CACCGGTTAC GGCAACGCCT TGGACAACGT CATTACCGGT
GGTGTCGGTA ACGACTACTT GTTTGGCGGA GCGGGCGCTG ACCGGTTCAT TGGTGGCGCT
GGCAACGACA CCGTGAGCTA TGGCGACAGC GGAGTCGGGG TGGCGATCAA CACCAAGACC
GGTGTGAACA CCGGTATCGC CGCAGGCGAT ACGTATGTGG GGATCGAAGC ACTTCAGGGC
TCAGGTAGCA ACGACACCTT TATCAGTGGT GAAGCGGCGG ATCAGTTCTA CGGTTCGGGC
GGTACCGACA CCATTGATTA TTCCGGCTCG TCCAGCGGCG TGACGGTGAG CCTGGTCGGC
GGCGTTGCGG GTGTGGGTGG TGATGCTCAG GGCGACAAGC TGTGGGAGTT CGAAACTGTC
ATCGGCTCGT CTTTCAATGA CGTCCTGACT GCGCAAACCT CAGGCAACAT CCTGAACGGT
GGCGCTGGCG ATGACATCTA CTACATCAAC GGCACCGGGG TGAATGTCAT CGAAGCCGCG
GGTGGCGGTG ATGACGAAGT GCGCACGATC ATGCTCAACC AGACACTGGC GGCCAACGTC
GAGCGCCTGA CCTACGTCGG CACCGGTAGC TTCACCGGTT ACGGCAACGC CTTGGACAAC
GTCATTACCG GTGGTGTCGG TAACGACTAC TTGTTTGGCG GAGCGGGTGC TGACCAGTTC
ATTGGTGGTG CCGGCAACGA CATCGTGAGC TATGGCGACA GCGGAGTCGG GGTGACGATC
AACACCAAGA CCGGTGTGAA CACCGGTATC GCCGCAGGCG ATACGTATGT GGGGATCGAA
GCACTTCAGG GCTCAGGTAG CAACGACACC TTTATCAGTG GTGAAGCGGC GGATCAGTTC
TACGGTTCGG GCGGTACCGA CACCATTGAT TATTCCGGCT CGTCCAGCGG CGTGACGGTG
AGCCTGGTCG GCGGCGTTGC GGGTGTGGGT GGTGATGCTC AGGGCGACAA GCTGTGGGAG
TTCGAAACTG TCATCGGCTC GTCTTTCAAT GACGTCCTGA CTGCGCAAAC CTCAGGCAAC
ATCCTGAACG GTGGCGCTGG CGATGACATC TACTACATCA ACGGCACCGG GGTGAATGTC
ATCGAAGCCG CGGGTGGCGG TGATGACGAA GTGCGCACGA TCATGCTCAA CCAGACACTG
GCGGCCAACG TCGAGCGCCT GACCTACGTC GGCACCGGTA GCTTCACCGG TTACGGCAAT
GCCTCAGACA ACATCATCAC CGGTGGGGTG GGGGCCGACA CCTTGTTTGG CGGAGCGGGT
GCTGACCAAT TCTTCGGTGG CGATGGTTTT GACACGGTCA GTTACGGCGA CAGTGCGGCG
GGTGTGACCA TCAACACCAA AACCGGCGTG AATACCGGTA TCGCCGCTGG CGATACATAT
AACGGTATCG AACAGATCCG GGGTTCCAGT TACGGCGATA TCTTTGTCGG GAGTGCCGGC
GTGGATCGTT TTGATGGTGG CGATGGCAAC GACATTCTCA GCTTTGCGGG CGAAAACTCT
GGCGTCACGC TGGATCTCAG CGCTGCGGTG CTTACCGGTA TTGCGGCGGG GGATTTCTAC
ACGTCGATCG AGGCATTCCA AGGCTCTGCT TATGCCGATA CTTTCACCGG CTCTAACGCA
TTAAGGGAAA GCTTTATCGG TGGCGGAGGC GCGGATACAT TGATTGGGGT GGGGCGAGGA
GACTCGGCCT GGTACGTCAA CAGTTCCAGT GCTGTGCAGG TCAATCTTCT GACCGGCACT
GGTGTCGGCG GCGATGCTCA GGGTGATGTA CTCACCAATA TCGATAACCT GGTGGGCTCA
GCCTTCAATG ACACCCTGAC CGGTAATGGC TACGCCAACA TGCTGGAAGG GGGTGACGGT
AACGACATCC TGTATGGCGG TGATGGCAGC GACACGCTGT ACGGTCATAG CTTCACCAAT
ACGGGGGCCC TGGCTGTACC GTTCGCGACG GATAACCAGG CTGACATCAT TTATGGCGGT
AATGGCGATG ATTACATCAT TGGCTATGTG CGCGATGTCG GTTCTGTCTT CTATGGTGAG
GCTGGCAATG ACAACATTAC GGTCATTTCA GGTGTCGCCG ACGGCGGCGA TGGTAACGAT
ACGTTGATGG GCCTGGGGCA CGGTTATGAA CTGCGTGGCG GTGCGGGCGC GGATAAGTTG
TACCTGAGTG CGTCGGGTGA TGCTTACGGC GGCGAGGGCA GCGATTCGTA CTTCGTGTCC
TCCAAAACCA TGGTCGCGAT TTTCGATGAG GGCACTACGG GTATCGATAT TGTGACTCTG
AAAAATATCC AGAGCTTCAA TGATGTCCGC ATCATGTCAA ACGATCAGGG CGTCTACATC
TTCAATGCTG TTGACGTACA GAATGGCAAC CTGGACTCGG GTCTGTTCCT GAAGGACTGG
AACAAGGGGG GCAACACCAT TGAAACCTTC TACACCAACA ACGGCGATTC CTTCACCATT
CCGGTGGTAG GACAGGCATC GGCCGAGCTG TCGATGGTCT GA
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| Protein sequence | MAVINGTSGT DTLVGTSSAD ELFGFAGNDS LSGGEGNDLL DGGAGADILN GGNGIDTASY
ANSTAGVTVN LATGTGVGAD AQGDTLTSIE AVIGSSFNDV LTAQTSGNTL NGGAGDDIYY
INGSGVNVIE AAGGGDDEVR TILLNHSLAA NVERLTYVGT GSFTGYGNAL DNVITGGVGN
DYLFGGAGAD RFIGGAGNDT VSYGDSGVGV TINTKTGVNT GIAAGDTYVG IEALQGSGSN
DTFISGEAAD QFYGSGGTDT IDYSGSSSGV TVSLVGGVAG VGGDAQGDKL WEFETVIGSS
FNDVLTAQTS GNTLNGGAGD DIYYINGSGV NVIEAAGGGD DEVRTIMLNQ TLAANVERLT
YVGTGSFTGY GNALDNVITG GVGNDYLFGG AGADRFIGGA GNDTVSYGDS GVGVAINTKT
GVNTGIAAGD TYVGIEALQG SGSNDTFISG EAADQFYGSG GTDTIDYSGS SSGVTVSLVG
GVAGVGGDAQ GDKLWEFETV IGSSFNDVLT AQTSGNILNG GAGDDIYYIN GTGVNVIEAA
GGGDDEVRTI MLNQTLAANV ERLTYVGTGS FTGYGNALDN VITGGVGNDY LFGGAGADQF
IGGAGNDIVS YGDSGVGVTI NTKTGVNTGI AAGDTYVGIE ALQGSGSNDT FISGEAADQF
YGSGGTDTID YSGSSSGVTV SLVGGVAGVG GDAQGDKLWE FETVIGSSFN DVLTAQTSGN
ILNGGAGDDI YYINGTGVNV IEAAGGGDDE VRTIMLNQTL AANVERLTYV GTGSFTGYGN
ASDNIITGGV GADTLFGGAG ADQFFGGDGF DTVSYGDSAA GVTINTKTGV NTGIAAGDTY
NGIEQIRGSS YGDIFVGSAG VDRFDGGDGN DILSFAGENS GVTLDLSAAV LTGIAAGDFY
TSIEAFQGSA YADTFTGSNA LRESFIGGGG ADTLIGVGRG DSAWYVNSSS AVQVNLLTGT
GVGGDAQGDV LTNIDNLVGS AFNDTLTGNG YANMLEGGDG NDILYGGDGS DTLYGHSFTN
TGALAVPFAT DNQADIIYGG NGDDYIIGYV RDVGSVFYGE AGNDNITVIS GVADGGDGND
TLMGLGHGYE LRGGAGADKL YLSASGDAYG GEGSDSYFVS SKTMVAIFDE GTTGIDIVTL
KNIQSFNDVR IMSNDQGVYI FNAVDVQNGN LDSGLFLKDW NKGGNTIETF YTNNGDSFTI
PVVGQASAEL SMV
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