Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4245 |
Symbol | |
ID | 3717823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4787329 |
End bp | 4788051 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | two component transcriptional regulator |
Protein accession | YP_349973 |
Protein GI | 77460466 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0492398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCAAG AAGCCTGGCA GGTATTGATA GTCGAGGACG ACCAGCGTCT GGCCGAACTG ACCCGTGAAT ACCTGCAAGC CAACGGATTG CGCGTGGAGA TCGAAGGCAA CGGTGCGCTG GCGGCGGCGC GGATCATCAA GGAGCAGCCG GACCTGGTGA TCCTCGACCT GATGCTCCCC GGCGAAGACG GCCTGAGCAT TTGCCGCAAG GTTCGCGATC GCTACGACGG GCCGATCCTG ATGCTCACCG CGCGCACCGA TGATGCCGAC CAGATCCTCG GCCTCGACCT CGGCGCCGAC GACTATGTCT GCAAACCGGT GCGCCCACGG CTGCTGCTGG CGCGTATCCA GGCGCTGCTG CGACGCAGTG ACACACTGGA GGCGCCAGCG GGCAATCCGC GTCGGCTGCA ATTCGGCCCG CTGGTGGTGG ACAACGCCTT GCGTGAAGCC TGGCTCAGCG ACAGTGGCAT CGAGCTGACC AGCGCCGAAT TCGATCTGCT CTGGCTGCTG GTGTCCAACG CTGGACGGAT CCTGTCCCGG GAAGAAATAT TCACCGCACT GCGCGGCATC GGTTACGACG GCCAGGACCG CTCGATCGAT GTGCGCATCT CGCGCATCCG CCCGAAAATC GGCGACGACC CCGATCACCC GCGCCTGATC AAGACCGTGC GCAGCAAAGG CTACCTGTTC GTGCCGGAAG CCTGCGCAGA ACTGCCGCTG TGA
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Protein sequence | MEQEAWQVLI VEDDQRLAEL TREYLQANGL RVEIEGNGAL AAARIIKEQP DLVILDLMLP GEDGLSICRK VRDRYDGPIL MLTARTDDAD QILGLDLGAD DYVCKPVRPR LLLARIQALL RRSDTLEAPA GNPRRLQFGP LVVDNALREA WLSDSGIELT SAEFDLLWLL VSNAGRILSR EEIFTALRGI GYDGQDRSID VRISRIRPKI GDDPDHPRLI KTVRSKGYLF VPEACAELPL
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