| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4244 |
|---|
| Symbol | |
|---|
| ID | 3717822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4785722 |
|---|
| End bp | 4787332 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | periplasmic sensor Signal transduction histidine kinase |
|---|
| Protein accession | YP_349972 |
|---|
| Protein GI | 77460465 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.484771 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.91746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTCGA TCTTCCTGCG CATCTATGGC GGCATGTGCG CGGCGCTGAT TCTGGTGGCG
GTGCTCGGTG TGCTGGCGCT GCACCTGCTC AACCAGGTGC GCAGCGAGCA ATACCGTGAG
CGTCTGGCCC ACGGCACGTT TTCGCTGATG GCCGACAACC TGCAACCGAT GAACGAAACC
GAGCGCCATC GCGCCTTGCT GGTGTGGGAG CGGCTGCTCG GGATTCCGCT GGCGCTGAAG
ACCTTCACCC AGACCGATCT CGACCTGACC CAGCGCACTC GCGTGCAGCG CGGCCAGGCC
CTGGTGGAGC AGACCGGCCC GCACGCGGCC AAGGTCTATC GGCTGGTCAG CGACAAGGAT
CAACTGGTGC TGGTGGGCGA GGTGCAGCAG ATCAGCGAGC AACTGGCCCG GGCGACCATC
TACCTGTTGG CCGATGAGCT GGTGCGGGTG CCCGTGGGCG AACAGCCCAA ACGACTGGCG
CAGTTGAAAG AAGACAAAGG CTTCGGTTTC GATTTGCGAC TGGTTACGGT CAGCGATGCC
GACATGGACG AAGACCAGAG CCGTCGGGTG TCCGAGGGCG ATACGGTGAT GGCGCTGGGC
AAGGGCGGCG ATTCGATCCG GGTGTTCGCC GGCATGGTCG GCACGCCGTG GGTGCTGGAA
ATCGGGCCGC TGTATCAGAT GAACCCGTAC CCGCCGGAAT GGCTGGTGCT GATCGCAGCC
CTCGGCCTGA CCCTGATCGG CCTGATTGTC TATCTATTGG TCCGCCAGCT CGAACGGCGT
TTGCGTGGAC TCGAAGCTGC CGCCACGCGC ATCGCCAAAG GCAGCCTGGA AACCCGGGTG
CCGGCCCGTG GTGCCGACTC GGTGGGCAAG CTGGCAGCGG CGTTCAACGG CATGGCCGAG
CACTTGCAGC AGTTGCTCGC CATTCAGCGT GAACTGGTGC GCGCGGTGTC CCACGAACTG
CGCACGCCGG TGGCGCGTCT GCGTTTCGGG CTGGAGATGA TCGGCTCGGC CACCACCCCG
CAGGCGCTGG AAAAATACCG CGAGGGCATG GACCACGACA TCGAGGACCT CGACAAGCTG
GTCGACGAAA TGCTCACGTA CGCCAGACTG GAACAGGGCT CGCCGGCGCT GACCTTCCAG
CGCATCGACC TGGATGCGCT GGTCAATCAG GTGATCGAAG AGCTGGCGCC TCTGCGCGCC
GAGGTCACGG TGCAGCGCGG TCTGTGCCTG TCGGCGGCGG ATTGCGATGA TGCCTGGGTC
GAGGCCGAGC CGCGTTACCT GCACCGCGCC TTGCAGAATC TGGTGAGCAA CGCCATGCGT
CATGCGCGTT CGAAGGTCAC GGTCAGTTAT CAGGTCGGGC AGATGCGTTG CCGGGTGGAT
GTCGAGGACG ACGGCCCCGG CGTGCCGGAA ACCGCCTGGG AGAAAATCTT CACGCCGTTC
CTGCGTCTGG ACGACAGCCG CACCCGGGCG TCCGGCGGAC ACGGGCTGGG CCTGTCGATC
GTGCGGCGGA TCATCCACTG GCACGACGGC CGGGCGCTGA TTGGCAAGAG CAAGAGCCTG
GGCGGGGCGT GTTTCAGTCT GAGCTGGCCG AGGAATCAGG AGCGGCGCTG A
|
|---|
| Protein sequence | MNSIFLRIYG GMCAALILVA VLGVLALHLL NQVRSEQYRE RLAHGTFSLM ADNLQPMNET
ERHRALLVWE RLLGIPLALK TFTQTDLDLT QRTRVQRGQA LVEQTGPHAA KVYRLVSDKD
QLVLVGEVQQ ISEQLARATI YLLADELVRV PVGEQPKRLA QLKEDKGFGF DLRLVTVSDA
DMDEDQSRRV SEGDTVMALG KGGDSIRVFA GMVGTPWVLE IGPLYQMNPY PPEWLVLIAA
LGLTLIGLIV YLLVRQLERR LRGLEAAATR IAKGSLETRV PARGADSVGK LAAAFNGMAE
HLQQLLAIQR ELVRAVSHEL RTPVARLRFG LEMIGSATTP QALEKYREGM DHDIEDLDKL
VDEMLTYARL EQGSPALTFQ RIDLDALVNQ VIEELAPLRA EVTVQRGLCL SAADCDDAWV
EAEPRYLHRA LQNLVSNAMR HARSKVTVSY QVGQMRCRVD VEDDGPGVPE TAWEKIFTPF
LRLDDSRTRA SGGHGLGLSI VRRIIHWHDG RALIGKSKSL GGACFSLSWP RNQERR
|
|---|
| |