Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4237 |
Symbol | |
ID | 3717815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4778993 |
End bp | 4779988 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | AraC family transcriptional regulator |
Protein accession | YP_349965 |
Protein GI | 77460458 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.339126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.787301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAAC GCACCATCGC CAGTCACTTT GCCCGCGCCG CCCTCGGTGG CGCGCGGCGC TCGGGTTACG ACTATTCGGA CCTGCTGCAG CAACTGGGTA TCAGCCCCGA ACTGCTCGAC GAGCCGCGCG CGCGGATCGC CCCGGAACAA TTCACCCAAC TGATCCAGAA CTTGTGGCTG GCCCTGGACG ACGAATACCT GGGTTTTGGC AACGCACCGA GCAAACCCGG CAGCTTCGCC ATGATGTGCC ACGCGATCAT TCATTGCCGC AGCCTGGAAA AGGCTCTGCA ACGCGGCTTA TTGTTTTATA GCCTATTCCC CGAAGCTCCG CGTCTGACCC TGACCCATGA AGACGAATGG GTGCGCCTGA GTCTCGACGA TGCGCAATTG TGGGACCCGG ATCACTTTCT CAGCGAGAGC CTGCTGGTGA TCTGGCATCG CCTCGGCAGC TGGCTGATCG GCCAGCGGAT TCGTCTGGAA CAGGCGAGCT TCAGCTACCC GAAACCGGCG CACGGGGCGG AATACGACCT GCTGTTTTCC TGCCCGCTGG AATTTTCGGC AGCGCAAAGC AGCCTGGTGT TTCACAGTCG CTATCTGCAC ATGCCGCTGT TGCAGGACGA ACGCACCCTC AAGCATTTCC TCGAACGCTC CCCCGCCGAT TTGCTGTCAC GCCCGGACGA CGGCAACAGC CTGAGCAGCC GGCTGCGTCG CTTGCTCAGC CATGACAGCG CACGCTGGCC CGACCTCGAA GCCGTGGCCG CGCACCTGCA CATCAGCCCG CAAACCCTGC GCCGGCATTT GCGCGAGGAA GGCACCAGTT TTCAGGAATT GAAGGATCAG TTGCGTCGGG ACATCGCGAT TTATCACCTG GGGCGCGCGG ATCTGTCGTT GCAACAGATC GCCGAACAAC TCGGTTTCTC CGAGCCGTCG GCGTTTCATC GGGCGTTCAA GAAGTGGACG GGGCTGACGC CGGGGGCTTA TCGGGCGCAG GCGTGA
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Protein sequence | MRERTIASHF ARAALGGARR SGYDYSDLLQ QLGISPELLD EPRARIAPEQ FTQLIQNLWL ALDDEYLGFG NAPSKPGSFA MMCHAIIHCR SLEKALQRGL LFYSLFPEAP RLTLTHEDEW VRLSLDDAQL WDPDHFLSES LLVIWHRLGS WLIGQRIRLE QASFSYPKPA HGAEYDLLFS CPLEFSAAQS SLVFHSRYLH MPLLQDERTL KHFLERSPAD LLSRPDDGNS LSSRLRRLLS HDSARWPDLE AVAAHLHISP QTLRRHLREE GTSFQELKDQ LRRDIAIYHL GRADLSLQQI AEQLGFSEPS AFHRAFKKWT GLTPGAYRAQ A
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