| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4222 |
|---|
| Symbol | |
|---|
| ID | 3717722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4765531 |
|---|
| End bp | 4768299 |
|---|
| Gene Length | 2769 bp |
|---|
| Protein Length | 922 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_349950 |
|---|
| Protein GI | 77460443 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.588582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.325016 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAGA AAGGCGTGCT CAAGAAACTG GGAATCAAAG GTCGCGTATT GTTGCTGACC
CTGTTGCCGA CCAGCCTGAT GGCACTGGTG CTGGGCGGGT ATTTCACCTG GACGCAGCAG
TCCGACCTGC AAACCCAACT GATGCAGCGC GGCGAAATGA TCGCCGAGCA ACTGGCTCCG
CTGGTGGCAC CGGCCATGGG CCACGGCGAT GCCGAACTGC TCGAGCGCAT CGCCACCCAG
TCCCTCGAAC AGCCGGACGT GCGCGCCGTC ACCTTTCTCG CGCCCGACCG CTCGCCCCTT
GCCCACGCCG GCCCGACCAT GCTCAATCAG GCGCCGAGCG GCGACAGCGC GCACTTGCTG
CGACGCAGCG GCAACGACGC CACGCGCTAT CTGCTGCCGG TCTTCGGCAA ACACCGCAAC
CTCGCCGGCG AACTGATCCC GCAAGAGTCC GACCGCCTGC TCGGCTGGGT CGAACTGGAG
CTGTCGCACA ACGGCATGTT GTTGCGCGGC TATCGAAGCC TGTTCGCCAG CCTGCTGCTG
ATTGGCGCGG GGCTGGCCGG CGCCGCCTTG CTGGCCTTGC GCATGGGCCG CACGATCAAC
CGCCCGCTGA GCCAGATCAA ACAGGCCGTC GCCCAGCTCA AGGACGGTCA CCTGGAAACC
CGTCTGCCGC CATTGGGCAG TCAGGAGCTG GATGAACTGG CGTCCGGCAT CAACCGCATG
GCCGGCACCC TGCAAAACGC CCGCGAAGAA TTGCAGCACA GCGTCGATCA GGCCACCGAA
GACGTGCGCC AGAACCTGGA AACCATCGAG ATCCAGAACA TCGAACTGGA CCTGGCCCGC
AAGGAAGCGC TGGAAGCGAG CCGGATCAAA TCCGAATTTC TCGCCAACAT GAGCCACGAG
ATCCGCACAC CGCTGAACGG CATTCTCGGT TTCACCCACC TGTTGCAGAA AAGCGAGCTG
ACCCCGCGCC AGCTCGACTA CCTGGGCACC ATCGAAAAAT CCGCCGACAG CCTGTTGGGG
ATCATCAACG AGATCCTCGA CTTCTCGAAG ATCGAGGCCG GCAAGCTGGT GCTCGACCAT
ATCCCGTTCA ACCTGCGCGA CCTGTTGCAG GACACCCTCA CCATCCTCGC CCCCGCTGCC
CACGCCAAGC AGCTGGAACT GGTGAGTCTG GTGTACCGCG ACACGCCGCT GTCGCTGGTC
GGTGATCCGC TGCGCCTCAA GCAGATCCTG ACGAATCTGG TGAGCAACGC GATCAAGTTC
ACCCGCGAAG GCACCATCGT CGCCCGCGCC ATGCTCGAAG AAGAAAACGA CGACAGCGTG
CAGTTGCGCA TCAGCATTCA GGACACCGGC ATCGGCCTGT CGAACCAGGA CGTGCGCGCG
TTGTTCCAGG CCTTCAGCCA GGCCGACAAC TCGCTGTCGC GCCAACCCGG CGGTACCGGT
CTGGGGCTGG TGATTTCCAA GCGTCTGATC GAACAGATGG GCGGCGAAAT CGGGGTCGAC
AGCACGCCGG GCGAAGGTTC GGAGTTCTGG ATCAGCCTGA ACCTGCCCAA GACCCGCGAC
GACGCCGAAG ACCTGCCCGC CGCGCCATTG CTCGGGCGTC GGGTGGCGGT ACTGGAAAAC
CATGAACTGG CGCGTCAGGC CCTGCAGCAT CAACTGGAAG ACTGCGGCCT CGACGTCACG
CCGTTCAATA CCCTGGAAAG CCTGACCAAC GGCGTCACCG GCGCCCATCA GACCGATCAG
GCCATCGATC TGGCCGTGCT CGGCATCACC AGCAACGACA TGCCGCCCGA ACGCCTGAAC
CAGCATATCT GGGATCTTGA GCACCTCGGT TGCCGGGTGC TGGTGTTGTG CCCGACCACC
GAGCTGACGC TCTATCACCT TTCGGTGCCC AATCCTCACA GCCAGCTGCA ATCGAAACCG
GCCTGCACCC GCAAACTCCG TCGTGCGCTG TCGGACATGG TCAACCCGCG CCAGTCGCGC
AGCGAACCGG GCGAACCGCT GTCGAGCCGC GCGCCGAAAG TGCTGTGTGT CGACGACAAC
CCGGCCAACC TGTTGCTGGT TCAGACCCTG CTCGAAGACA TGGGCGCCAA GGTGCTGGCC
GTTGAAAGCG GTTACGCCGC GGTCAAGGCG GTACAGAGCG AAAGCTTCGA TCTGGTGCTG
ATGGATGTGC AGATGCCCGG CATGGACGGA CGCCAGAGCA CCGAAACCAT TCGCCAGTGG
GAAAGCGAGC GCCATTGCAC GCCGCTGCCG ATCGTCGCCC TCACCGCCCA CGCCATGGCC
AATGAAAAAC GCGCGCTGCT GCAAAGCGGC ATGGACGACT ACCTGACCAA GCCGATCAGC
GAGCGGCAAC TGGCGCAGGT GGTGCTGAAG TGGACCGGCC TGGCGCTGCG CAATCAGGCG
CCGGACCGTG GCGGCGAAAG CCTGCTGGGC AATCAGGAAC TGCCGATTCT CGATCACGAA
GAAGGTTTGC GCCTGGCTGC CGGCAAGGCG GATCTGGCGG CGGACATGCT GGCGATGCTG
CTGGCCTCGC TCGAAGCCGA CCGGGAAGCC ATCCGCACCG CCCGCGACCA TCAGGATCAG
AACGCTCTGC TTGAACGGGT GCACCGCCTG CATGGCGCCA CTCGCTACTG CGGCGTGCCG
CAATTGCGCG CCGCCTGCCA ACGCAGCGAA ACCCTGCTCA AGCAGGACGA TCCCAAGGCC
TCGGCCGCGC TGGACGAGCT GGAACGGGCG ATCAATCGTC TGGCGGCCCA GGCGAAGATC
AGCGCCTGA
|
|---|
| Protein sequence | MQEKGVLKKL GIKGRVLLLT LLPTSLMALV LGGYFTWTQQ SDLQTQLMQR GEMIAEQLAP
LVAPAMGHGD AELLERIATQ SLEQPDVRAV TFLAPDRSPL AHAGPTMLNQ APSGDSAHLL
RRSGNDATRY LLPVFGKHRN LAGELIPQES DRLLGWVELE LSHNGMLLRG YRSLFASLLL
IGAGLAGAAL LALRMGRTIN RPLSQIKQAV AQLKDGHLET RLPPLGSQEL DELASGINRM
AGTLQNAREE LQHSVDQATE DVRQNLETIE IQNIELDLAR KEALEASRIK SEFLANMSHE
IRTPLNGILG FTHLLQKSEL TPRQLDYLGT IEKSADSLLG IINEILDFSK IEAGKLVLDH
IPFNLRDLLQ DTLTILAPAA HAKQLELVSL VYRDTPLSLV GDPLRLKQIL TNLVSNAIKF
TREGTIVARA MLEEENDDSV QLRISIQDTG IGLSNQDVRA LFQAFSQADN SLSRQPGGTG
LGLVISKRLI EQMGGEIGVD STPGEGSEFW ISLNLPKTRD DAEDLPAAPL LGRRVAVLEN
HELARQALQH QLEDCGLDVT PFNTLESLTN GVTGAHQTDQ AIDLAVLGIT SNDMPPERLN
QHIWDLEHLG CRVLVLCPTT ELTLYHLSVP NPHSQLQSKP ACTRKLRRAL SDMVNPRQSR
SEPGEPLSSR APKVLCVDDN PANLLLVQTL LEDMGAKVLA VESGYAAVKA VQSESFDLVL
MDVQMPGMDG RQSTETIRQW ESERHCTPLP IVALTAHAMA NEKRALLQSG MDDYLTKPIS
ERQLAQVVLK WTGLALRNQA PDRGGESLLG NQELPILDHE EGLRLAAGKA DLAADMLAML
LASLEADREA IRTARDHQDQ NALLERVHRL HGATRYCGVP QLRAACQRSE TLLKQDDPKA
SAALDELERA INRLAAQAKI SA
|
|---|
| |