Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4221 |
Symbol | |
ID | 3717721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4764607 |
End bp | 4765329 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | two component transcriptional regulator |
Protein accession | YP_349949 |
Protein GI | 77460442 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.430301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.246318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCTG TCTCCATTGG CCAACCCCGC ATTCTTTCCA TCGAAGACGA CCCCGTCCTC GGTGCCTATG TCCATGAACA TCTGGGCCGC AGCGGCTTTC AGGTCACCTG GTGCCAGAAC GGCAGCGAAG GCCTGAGTAT CGCCCGGCGC CAGCCGTTCG ATGTGGTGTT GATGGACATT CTGTTGCCGG GGCTCGACGG ATTGAATGTC CTGACCCAAC TGCGTCAGAG CCATTCCACC CCGGTGTTGC TGATGTCGGC CCTCGGTGCC GAGGCCGACC GTATCAGCGG GTTCCGCCTT GGCGCCGACG ACTATTTGCC CAAACCCTTC AGCATGGCTG AGCTGCATGT GCGCATTGAA GCGATCCTGC GCCGGGTCGC CCTCGATCGT CGCCCGACGG CCGTCGCTGC GGTGGTGCCG GTCGGCGGGC TGCGTTTCGA CGACGAGCAG TGCGAGGTGT TCTACCTCGA CCAGCCCGCC GGCCTGACCC GCAGCGAATA CCGCCTGCTG GAAACCCTCA ATCGCAACGA CGAGGAAGTG CTGAGCAAGG CCTTCCTTTA TCAGCACGTT CTTCAGCGCG GTTATGCGGC CCACGATCGC AGCCTTGATA TGCACATCAG CCAGATTCGC CGCAAACTCA AGTCGGTCGG CTACACCGAG CGCGAAGTGC GCACGGTGTG GGGCAAGGGT TACGTTCTGA GTGCCGTCGA TGAAAGTGTC TGA
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Protein sequence | MTPVSIGQPR ILSIEDDPVL GAYVHEHLGR SGFQVTWCQN GSEGLSIARR QPFDVVLMDI LLPGLDGLNV LTQLRQSHST PVLLMSALGA EADRISGFRL GADDYLPKPF SMAELHVRIE AILRRVALDR RPTAVAAVVP VGGLRFDDEQ CEVFYLDQPA GLTRSEYRLL ETLNRNDEEV LSKAFLYQHV LQRGYAAHDR SLDMHISQIR RKLKSVGYTE REVRTVWGKG YVLSAVDESV
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