| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4217 |
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| Symbol | |
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| ID | 3717717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 4758406 |
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| End bp | 4760649 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
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| Protein accession | YP_349945 |
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| Protein GI | 77460438 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.630753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.166967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACAGG TGAGAGCACA CCAGCCGATC AACACTGACG GCAGTATCAA TCTCGAGGCT
TGGCTCGATC ATGCGGTCAG TGTCGATCTG GCACTGGATC GCGAAGCCTT GAAAGAGGCC
TGCGAGTACG CTCGCCAGGC CGAGCAACAG TCCAATGCAG CGAAGAATCT CTGGTCCGAA
GGCAGCGGCA GTTTCAGCAC TGGCCTCGAG ATCGCCGAGA TCCTTGCCGA CCTCAAGCTC
GATCAGGATT CGCTGGTGGC TGCGGTTCTC TATCGCGGCG TGCGCGAAGG CCAGATCGAA
CTCGCGGCGG TCAGCCAGCG CTTCGGCCCG GTGGTCGCCA AGCTGATCGA CGGCGTGCTG
CGCATGGCGG CAATCAGTGC CAGCCTCAGC CCCCGCCAGT CGATGGTGCT CGGCACCCAG
GGCCAGGTGG AAAACCTGCG CAAGATGCTG GTGGCGATGG TCGACGACGT GCGTGTCGCG
CTGATCAAGC TCGCCGAACG CACCTGCGCG ATCCGTGCAG TGAAAACCGC CGACGACGAA
AAACGTAACC GGGTCGCCCG GGAAGTGTTC GACATCTATG CGCCGCTCGC GCATCGACTC
GGCATCGGCC ATATCAAATG GGAACTGGAG GACTTGTCCT TCCGTTACCT GGAACCCGAT
CAATACAAAC AGATCGCCAA GCTGCTGCAT GAACGGCGGC TGGATCGTGA GCGTTTCATC
GCCGATGTGA TGACCCAGCT CAAGGACGAG CTGCAAGCCA CCGGCGTCGA AGCCGACATC
AGCGGTCGGG CCAAACACAT CTATTCGATC TGGCGCAAAA TGCAGCGCAA GGGTCTGGAA
TTCAGCCAGA TCTATGACGT GCGTGCGGTG CGCGTGCTGG TGCCGGAAAT GCGCGACTGC
TACACCGCGC TCGGCATCGT CCACACCCTG TGGCGGCATA TCCCGAAAGA GTTCGACGAC
TACATCGCCA ACCCGAAAGA GAACGGCTAC CGCTCGCTGC ACACGGCGGT GATCGGCCCG
GAAGGCAAGG TGCTGGAAGT CCAGATCCGG ACCCATTCGA TGCACGAAGA GGCCGAGCTC
GGCGTCTGCG CGCACTGGCG CTACAAGGGC ACCGACGTCA AGTCCGGCTC CAATCACTAC
GAAGAGAAAA TCTCCTGGCT GCGTCAGGTC CTCGAGTGGC ACGAAGAGCT GGGCGACATC
GGTGGTCTGG CCGAACAGTT GCGGGTCGAT ATCGAGCCGG ATCGGGTCTA CATCTTCACC
CCGGACGGTC ACGCCATCGA CTTGCCGAAG GGCGCGACGC CGCTGGATTT CGCCTACCGC
GTGCACACCG AAATCGGTCA CAACTGCCGT GGCGCGAAGA TCAACGGGCG CATCGTTCCG
CTCAACTACA GCCTGCAGAC CGGCGAGCAG GTCGAGATCA TCACCAGCAA GCACGGCACC
CCAAGCCGCG ACTGGCTGAA CCCGAACCTG GGCTACGTCA CCACGTCCCG GGCGCGGGCG
AAGATCGTGC ACTGGTTCAA GCTGCAGGCA CGCGACCAGA ACGTCGCGGC GGGCAAGACC
CTGCTCGAGC GCGAACTCAA TCGCCTCGGC CTGCCGGCGG TGGATTTCGA CAAGCTGGCC
GACAAGGCCA ACATGAAAAC CGCCGAAGAC ATGTTCGCCG CCCTCGGGGC CGGCGACCTG
CGTCTGGCGC AACTGGTCAA CCTGGCGCAA CAGCTGGTCG AGCCGGAACG CGGCAACGAA
CAGCTGGAAC TGATCCCGCG CAAGGCCACC GGCTACAAGC CGGGCAAGCG CGGCGACATC
CAGATCCAGG GCGTCGGCAA CCTGATGACC CAGATGGCCG GCTGCTGCCA GCCGTTGCCG
GGCGATGCGA TCGTCGGCTA CATCACCCAG GGCCGTGGCG TGAGCATTCA CCGTCAGGAC
TGCGCCTCGG TGCTGCAACT GGCCGGGCGC GAGCCGGAGC GGATCATCCA GGTCAGCTGG
GGGCCGGTGC CGGTGCTCAC CTATCCGGTG GACATCGTCA TCCGCGCCTA CGACCGTTCC
GGTCTGCTGC GTGACGTTTC GCAGGTGCTG CTCAACGAGC GGATCAACGT GCTGGCGGTC
AACACCCGCT CGAACAAGGA GGACAACACC GCGCTGATGT CCCTGACCAT CGAGATTCCG
GGTCTGGACG CGCTGGGGCG GTTGCTGGGG CGGATTTCCC AGTTGCCGAA CATCATCGAA
ACGCGGCGTA ACCGGACTCC ATGA
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| Protein sequence | MVQVRAHQPI NTDGSINLEA WLDHAVSVDL ALDREALKEA CEYARQAEQQ SNAAKNLWSE
GSGSFSTGLE IAEILADLKL DQDSLVAAVL YRGVREGQIE LAAVSQRFGP VVAKLIDGVL
RMAAISASLS PRQSMVLGTQ GQVENLRKML VAMVDDVRVA LIKLAERTCA IRAVKTADDE
KRNRVAREVF DIYAPLAHRL GIGHIKWELE DLSFRYLEPD QYKQIAKLLH ERRLDRERFI
ADVMTQLKDE LQATGVEADI SGRAKHIYSI WRKMQRKGLE FSQIYDVRAV RVLVPEMRDC
YTALGIVHTL WRHIPKEFDD YIANPKENGY RSLHTAVIGP EGKVLEVQIR THSMHEEAEL
GVCAHWRYKG TDVKSGSNHY EEKISWLRQV LEWHEELGDI GGLAEQLRVD IEPDRVYIFT
PDGHAIDLPK GATPLDFAYR VHTEIGHNCR GAKINGRIVP LNYSLQTGEQ VEIITSKHGT
PSRDWLNPNL GYVTTSRARA KIVHWFKLQA RDQNVAAGKT LLERELNRLG LPAVDFDKLA
DKANMKTAED MFAALGAGDL RLAQLVNLAQ QLVEPERGNE QLELIPRKAT GYKPGKRGDI
QIQGVGNLMT QMAGCCQPLP GDAIVGYITQ GRGVSIHRQD CASVLQLAGR EPERIIQVSW
GPVPVLTYPV DIVIRAYDRS GLLRDVSQVL LNERINVLAV NTRSNKEDNT ALMSLTIEIP
GLDALGRLLG RISQLPNIIE TRRNRTP
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