Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4217 |
Symbol | |
ID | 3717717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4758406 |
End bp | 4760649 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
Protein accession | YP_349945 |
Protein GI | 77460438 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.630753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.166967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACAGG TGAGAGCACA CCAGCCGATC AACACTGACG GCAGTATCAA TCTCGAGGCT TGGCTCGATC ATGCGGTCAG TGTCGATCTG GCACTGGATC GCGAAGCCTT GAAAGAGGCC TGCGAGTACG CTCGCCAGGC CGAGCAACAG TCCAATGCAG CGAAGAATCT CTGGTCCGAA GGCAGCGGCA GTTTCAGCAC TGGCCTCGAG ATCGCCGAGA TCCTTGCCGA CCTCAAGCTC GATCAGGATT CGCTGGTGGC TGCGGTTCTC TATCGCGGCG TGCGCGAAGG CCAGATCGAA CTCGCGGCGG TCAGCCAGCG CTTCGGCCCG GTGGTCGCCA AGCTGATCGA CGGCGTGCTG CGCATGGCGG CAATCAGTGC CAGCCTCAGC CCCCGCCAGT CGATGGTGCT CGGCACCCAG GGCCAGGTGG AAAACCTGCG CAAGATGCTG GTGGCGATGG TCGACGACGT GCGTGTCGCG CTGATCAAGC TCGCCGAACG CACCTGCGCG ATCCGTGCAG TGAAAACCGC CGACGACGAA AAACGTAACC GGGTCGCCCG GGAAGTGTTC GACATCTATG CGCCGCTCGC GCATCGACTC GGCATCGGCC ATATCAAATG GGAACTGGAG GACTTGTCCT TCCGTTACCT GGAACCCGAT CAATACAAAC AGATCGCCAA GCTGCTGCAT GAACGGCGGC TGGATCGTGA GCGTTTCATC GCCGATGTGA TGACCCAGCT CAAGGACGAG CTGCAAGCCA CCGGCGTCGA AGCCGACATC AGCGGTCGGG CCAAACACAT CTATTCGATC TGGCGCAAAA TGCAGCGCAA GGGTCTGGAA TTCAGCCAGA TCTATGACGT GCGTGCGGTG CGCGTGCTGG TGCCGGAAAT GCGCGACTGC TACACCGCGC TCGGCATCGT CCACACCCTG TGGCGGCATA TCCCGAAAGA GTTCGACGAC TACATCGCCA ACCCGAAAGA GAACGGCTAC CGCTCGCTGC ACACGGCGGT GATCGGCCCG GAAGGCAAGG TGCTGGAAGT CCAGATCCGG ACCCATTCGA TGCACGAAGA GGCCGAGCTC GGCGTCTGCG CGCACTGGCG CTACAAGGGC ACCGACGTCA AGTCCGGCTC CAATCACTAC GAAGAGAAAA TCTCCTGGCT GCGTCAGGTC CTCGAGTGGC ACGAAGAGCT GGGCGACATC GGTGGTCTGG CCGAACAGTT GCGGGTCGAT ATCGAGCCGG ATCGGGTCTA CATCTTCACC CCGGACGGTC ACGCCATCGA CTTGCCGAAG GGCGCGACGC CGCTGGATTT CGCCTACCGC GTGCACACCG AAATCGGTCA CAACTGCCGT GGCGCGAAGA TCAACGGGCG CATCGTTCCG CTCAACTACA GCCTGCAGAC CGGCGAGCAG GTCGAGATCA TCACCAGCAA GCACGGCACC CCAAGCCGCG ACTGGCTGAA CCCGAACCTG GGCTACGTCA CCACGTCCCG GGCGCGGGCG AAGATCGTGC ACTGGTTCAA GCTGCAGGCA CGCGACCAGA ACGTCGCGGC GGGCAAGACC CTGCTCGAGC GCGAACTCAA TCGCCTCGGC CTGCCGGCGG TGGATTTCGA CAAGCTGGCC GACAAGGCCA ACATGAAAAC CGCCGAAGAC ATGTTCGCCG CCCTCGGGGC CGGCGACCTG CGTCTGGCGC AACTGGTCAA CCTGGCGCAA CAGCTGGTCG AGCCGGAACG CGGCAACGAA CAGCTGGAAC TGATCCCGCG CAAGGCCACC GGCTACAAGC CGGGCAAGCG CGGCGACATC CAGATCCAGG GCGTCGGCAA CCTGATGACC CAGATGGCCG GCTGCTGCCA GCCGTTGCCG GGCGATGCGA TCGTCGGCTA CATCACCCAG GGCCGTGGCG TGAGCATTCA CCGTCAGGAC TGCGCCTCGG TGCTGCAACT GGCCGGGCGC GAGCCGGAGC GGATCATCCA GGTCAGCTGG GGGCCGGTGC CGGTGCTCAC CTATCCGGTG GACATCGTCA TCCGCGCCTA CGACCGTTCC GGTCTGCTGC GTGACGTTTC GCAGGTGCTG CTCAACGAGC GGATCAACGT GCTGGCGGTC AACACCCGCT CGAACAAGGA GGACAACACC GCGCTGATGT CCCTGACCAT CGAGATTCCG GGTCTGGACG CGCTGGGGCG GTTGCTGGGG CGGATTTCCC AGTTGCCGAA CATCATCGAA ACGCGGCGTA ACCGGACTCC ATGA
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Protein sequence | MVQVRAHQPI NTDGSINLEA WLDHAVSVDL ALDREALKEA CEYARQAEQQ SNAAKNLWSE GSGSFSTGLE IAEILADLKL DQDSLVAAVL YRGVREGQIE LAAVSQRFGP VVAKLIDGVL RMAAISASLS PRQSMVLGTQ GQVENLRKML VAMVDDVRVA LIKLAERTCA IRAVKTADDE KRNRVAREVF DIYAPLAHRL GIGHIKWELE DLSFRYLEPD QYKQIAKLLH ERRLDRERFI ADVMTQLKDE LQATGVEADI SGRAKHIYSI WRKMQRKGLE FSQIYDVRAV RVLVPEMRDC YTALGIVHTL WRHIPKEFDD YIANPKENGY RSLHTAVIGP EGKVLEVQIR THSMHEEAEL GVCAHWRYKG TDVKSGSNHY EEKISWLRQV LEWHEELGDI GGLAEQLRVD IEPDRVYIFT PDGHAIDLPK GATPLDFAYR VHTEIGHNCR GAKINGRIVP LNYSLQTGEQ VEIITSKHGT PSRDWLNPNL GYVTTSRARA KIVHWFKLQA RDQNVAAGKT LLERELNRLG LPAVDFDKLA DKANMKTAED MFAALGAGDL RLAQLVNLAQ QLVEPERGNE QLELIPRKAT GYKPGKRGDI QIQGVGNLMT QMAGCCQPLP GDAIVGYITQ GRGVSIHRQD CASVLQLAGR EPERIIQVSW GPVPVLTYPV DIVIRAYDRS GLLRDVSQVL LNERINVLAV NTRSNKEDNT ALMSLTIEIP GLDALGRLLG RISQLPNIIE TRRNRTP
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