Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4184 |
Symbol | fadE |
ID | 3712548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4720690 |
End bp | 4723137 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_349912 |
Protein GI | 77460405 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTTGT TGTGGATACT GGTTCTGATC GTCGGCGTGG CGTATCTGGC CCACCGGCGC ATCGCCCCGC TGCCGGCACT GGGTATCGTC GCCGCTTACC TGTTGGCGAT GGGGATTTTC AGCCACGCAC CGGGCTGGTT GCTGCTGATT TTCTGGGTCG TGCTGGCCCT GGTGGCCGTC CCGCTGCTGT TGCCTGACCT GCGCCGCAAA CACTTTACCG CGCCGCTGTT CAGCTGGTTC CAGAAAACCC TGCCACCGAT GTCGCAGACC GAACGCGACG CGATCGACGC CGGCACGGTG TGGTGGGACG GCGAACTGTT CAGCGGCCGC CCGGACTGGG ACAAGCTGCT GTCCTATCCC AAGGTGCAAC TGAGCGAAGA GGAACAGGCG TTCATCGACG GCCCGACCGA AGAACTCTGC GCGATGGTCA CCGACTGGCA GATCGGCCAG TCGATGGACT TGCCGGCCGA AGCCTGGACC CACATCAAGG AACACGGTTT CTTCGCCCTG ATCATTCCCA AGGAGTTCGG CGGCAAGGGT TTTTCCGCCT ACGCCCACTC CCAGGTGGCG ATGAAACTGG CGACCCGCAG CGGCGACCTC GCCTCCACCG TGATGGTGCC CAACTCCCTC GGCCCGGCCG AACTGCTGCT GCATTACGGC ACCGACGAAC AACGCAATCA TTACCTGCCA CGGCTGGCCC GGGGCGACGA TATTCCGTGC TTTGCGCTGA CCGGCCCGCT CGCCGGTTCA GACGCGGGCG CCATGCCCGA CACCGGGATC ATCTGCAAAG GCGTATGGGA AGGCCAGGAA ACCCTCGGCC TGCGCCTGAA CTGGGAAAAA CGCTACATCA CCCTCGGCCC GGTCGCGACC TTGCTCGGCC TGGCCTTCAA GGCCTATGAC CCGGATCACC TGCTCGGCGA CAAAGAAGAC CTCGGCATCA GCCTCGCGCT GATCCCGACC GATACTCCCG GCGTGGAAAT CGGTCGCCGC CACCTGCCGC TGGGCGCCGC GTTCATGAAC GGCCCCAACT CCGGCAAGAA CGTGTTCATC CCGCTGGACT ACCTCATCGG CGGCCAGGAC ATGCTCGGCA AAGGCTGGAT GATGCTGATG AACTGCCTGT CGGTCGGGCG TTCGATCTCG CTGCCGGCAG TGGGTACCGG CGCGGCCAAG TTCACCAGTC TGGTGACCGG GCAATACGCG CAGATTCGCG AGCAGTTCAA CGTGCCACTG TCAGCGTTCG AAGGCATTCA GGAAGCCATG GCGCGGATCG GCGGCAACGC CTGGATGATG GACGCCGCAC GAATGCTGAC TGCCAATGCG GTGGATCTGG GCGAGAAACC TTCTGTGCTG TCGGCGATCC TCAAATATCA CCTCACCGAA CGCGGTCGCG AGTGCATCAG CCACGCCATG GACGTGCACG GCGGCAAGGC GATCATCATG GGCCCGAACA ACTACCTGGG CCGCAGCTGG AACGGCGCGC CGATCTTCAT CACCGTGGAA GGCGCGAACA TTCTTTCGCG CAACCTGATG ATCTTCGGCC AGGGCGCCAT CCGCTGCCAT CCGTTCGTGC TCAAGGAAAT GGCCCTCGCC GGACGCGAGG ACAAGGACCA GGCGCTCAAG GAATTCGATG GCCTGCTGCT CAAGCACATC GGATTTGCCG TGAGCAACGC CGCCAGCACG CTGATGCTGA ACCTCGGCTT CGGTCATTTC GAACATGCAC CGGGAGACAA GCTCAGCCAA GGTTACTTCC GCGCTCTCAA CCGTCAGGCT GCCGCGTTTG CCATGCTCGC CGACCTGAGC ATGATGCTGC TGGGTGGCGA GCTGAAACGG CGCGAGCGTT TGTCGGCGCG TCTAGGTGAT GTGCTGAGCA ACCTGTATCT GGCCTCGGCG GCGCTCAAGC GTTACCACGA CCTCGATTCC CCGGCGTACA TGGAACCGCT GTTCCGATGG GCCATGGAAG AAAGCCTCGG CCAGTCGGAA AAAGCGCTGG ATGAACTGCT GACCAACTTC CCGAACCGAG TCTTTGGCTG CCTGCTGCGC GTGATCGTGT TCCCGTTCGG TCGCCGTCAC AAAGGCCCGT CGGACAGACT CGGCGCCGAA GTGGCTGCGG TCATCGGCCG GGCCAAGGGC GATCCGGCGC TGGAAGAACT GCTTGCCGGC TGCTATCGCC CGCAATCGGC CGACGATGCG GTCGGTGCTC TGCAACACGC CTGCGATCAG TTGAACGCTG CGCAACCGCT GCACAAAAAG CTGCACACGT CGCTCAAGAG CGGTCAGGTC AAACCGGTTG CCGGCGAACA CGCCATCGAT GCCGCACTGG AGGCCGGGGT GTTGCAGGCC GTGGAAGCCC AGACCCTGCG TGATGCCGAA GCGGCGCGGC GCAAGGTGAT CGATGTCGAT GATTTCGACA AGGAGCAACT GAAACCGGCG GACGGCAAAA TCCGCTGA
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Protein sequence | MLLLWILVLI VGVAYLAHRR IAPLPALGIV AAYLLAMGIF SHAPGWLLLI FWVVLALVAV PLLLPDLRRK HFTAPLFSWF QKTLPPMSQT ERDAIDAGTV WWDGELFSGR PDWDKLLSYP KVQLSEEEQA FIDGPTEELC AMVTDWQIGQ SMDLPAEAWT HIKEHGFFAL IIPKEFGGKG FSAYAHSQVA MKLATRSGDL ASTVMVPNSL GPAELLLHYG TDEQRNHYLP RLARGDDIPC FALTGPLAGS DAGAMPDTGI ICKGVWEGQE TLGLRLNWEK RYITLGPVAT LLGLAFKAYD PDHLLGDKED LGISLALIPT DTPGVEIGRR HLPLGAAFMN GPNSGKNVFI PLDYLIGGQD MLGKGWMMLM NCLSVGRSIS LPAVGTGAAK FTSLVTGQYA QIREQFNVPL SAFEGIQEAM ARIGGNAWMM DAARMLTANA VDLGEKPSVL SAILKYHLTE RGRECISHAM DVHGGKAIIM GPNNYLGRSW NGAPIFITVE GANILSRNLM IFGQGAIRCH PFVLKEMALA GREDKDQALK EFDGLLLKHI GFAVSNAAST LMLNLGFGHF EHAPGDKLSQ GYFRALNRQA AAFAMLADLS MMLLGGELKR RERLSARLGD VLSNLYLASA ALKRYHDLDS PAYMEPLFRW AMEESLGQSE KALDELLTNF PNRVFGCLLR VIVFPFGRRH KGPSDRLGAE VAAVIGRAKG DPALEELLAG CYRPQSADDA VGALQHACDQ LNAAQPLHKK LHTSLKSGQV KPVAGEHAID AALEAGVLQA VEAQTLRDAE AARRKVIDVD DFDKEQLKPA DGKIR
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