Gene Pfl01_4180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4180 
Symbol 
ID3712544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4717273 
End bp4718052 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349908 
Protein GI77460401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.806427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCG AGCTGCGCCC CAACCTCGTT GCCCTCAACA CCATCGTTTA CCGCGAAGTC 
AGACGCTTCA CCCGGATCTG GCCGCAGACC CTGCTGCCGC CGGCGATCAC CATGGTTTTG
TACTTCGTGA TCTTCGGTAA CCTGATCGGC CGGCAGATCG GCGACATGGG TGGCTTCACC
TACATGGAGT ACATCGTGCC GGGTCTGATC ATGATGTCGG TGATCACCAA CTCCTACGGC
AACGTGGTGT CGAGCTTCTT CGGCAGCAAG TTCCAGCGCT CCATCGAAGA ACTGATGGTG
TCGCCGGTGT CGCCGCACAC GATCCTGATC GGTTACACGA TCGGTGGCGT CTTGCGAGGC
CTGATGGTGG GTGTGATCGT GACGATTCTG TCGTTGTTCT TCACCCATTT GCAGGTACAC
CACCTCGGTG TCACGGTGCT GGTGGTGGTG CTGACGGCAA CGATCTTCTC ATTGCTGGGT
TTCATCAACG CGGTGTTTGC GCGCAACTTC GATGACATCT CGATCATCCC GACCTTCGTG
CTGACCCCGC TGACCTACCT CGGTGGCGTG TTCTATTCGA TCACCTTGCT GCCGCCGTTC
TGGCAGACCG TGTCGCTGGC CAACCCGGTG CTGCATATGG TCAACGCCTT CCGTTACGGC
ATCCTCGGTG TGTCGGACAT TCGCATCGGT ATCGCGATCA CCTTCATGCT GGTGGCGACC
GTGGTGCTGT ATTTCGGTTG TGCGCGGCTG CTGGTGAGCG GGCGCGGAAT GCGCACCTGA
 
Protein sequence
MSSELRPNLV ALNTIVYREV RRFTRIWPQT LLPPAITMVL YFVIFGNLIG RQIGDMGGFT 
YMEYIVPGLI MMSVITNSYG NVVSSFFGSK FQRSIEELMV SPVSPHTILI GYTIGGVLRG
LMVGVIVTIL SLFFTHLQVH HLGVTVLVVV LTATIFSLLG FINAVFARNF DDISIIPTFV
LTPLTYLGGV FYSITLLPPF WQTVSLANPV LHMVNAFRYG ILGVSDIRIG IAITFMLVAT
VVLYFGCARL LVSGRGMRT