Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4176 |
Symbol | |
ID | 3712540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4713181 |
End bp | 4713609 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_349904 |
Protein GI | 77460397 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0268987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.49506 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATTCC GTCGCAAGCC CCGGGAAACC ATCGACATCA ACCTCGCGTC GCTGATTGAC GTGGTGTTCA TCCTGTTGCT GTTTTTCGTC GTGACCACCA CCTTCACCCG TGAAACCCAG TTGCGCGTCG ATCTGCCGGA AGCGGTCAGC GGTTCGCCGG CCGAGGATCA GCAGGTCAAG CAACTGGACG TGGCCATCAG CGCCGAAGGC GTGTTCTCGG TGAACAACAA GATTCTGCCG AAGAACGATC TGGCGACCCT GATGGAAGCC ATGCAGAAAG AAGCCAACGG CGACACCAAC ATGCCGTTGT CAATCAGTGC TGACGGCAAG ACTCAGCACC AATCCGTGAT CACCGCCATG GACGCGGCCG GCAAGCTCGG TTTCAGCCAT CTGCGCATGA CCACGGTCGA GGCGGCGCCC AAATCCTGA
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Protein sequence | MKFRRKPRET IDINLASLID VVFILLLFFV VTTTFTRETQ LRVDLPEAVS GSPAEDQQVK QLDVAISAEG VFSVNNKILP KNDLATLMEA MQKEANGDTN MPLSISADGK TQHQSVITAM DAAGKLGFSH LRMTTVEAAP KS
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