Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4173 |
Symbol | |
ID | 3712537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4711200 |
End bp | 4711964 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
Protein accession | YP_349901 |
Protein GI | 77460394 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.313523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.542836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG CCTTCACCGT TGTCATCCCG TCGCGTTACG CCTCGACCCG TCTGCCGGGC AAGCCGCTGC TGGACATCGC CGGCAAGCCG ATGATCCAGC ACGTCTGGGA GCAGGCGAGC AAAAGCAGCG CCAGCCGTGT GGTGGTGGCG ACCGACGATG CGCGGATTGT CGAGGCCTGC AAGGCCTTCG GCGCCGAAGT GGTGCTGACC CGTGAAGATC ACAACTCCGG CACCGATCGT CTGGCTGAAG TGGCTGCCAA GCTGGGTCTG GAGCCGGATG CCATCGTGGT CAACGTGCAG GGTGACGAAC CGCTGATCCC GCCGAGCGTG ATCGATCAGG TCGCCGCCAA CCTCGCGGCC CACACCGAAG CGCGCATGGC CACCTTGGCC GAGCCGATCG AAGACGTGGA AACCTTGTTC AACCCGAACG TGGTCAAGGT CGTCAGCGAC CTCAACGGTC TGGCGCTGAC CTTCAGTCGC GCGACCCTGC CATTGGCTCG CGATGCGTTC GCCAAGCGCC GCGACGTGCT GCCGGAAGGC GTACCGTATC GTCGCCACAT CGGCATCTAT GCCTACCGCG CCGGTTTCCT TCAGGACTTT GTGAGCTGGG GCCCGTGCTG GCTGGAAAAC ACCGAATCCC TCGAACAACT GCGTGCCCTG TGGCACGGCG TGCGGATTCA TGTGGCGGAC GCGTTGATCG CGCCGCCGAC CGGGGTCGAC ACCGCCGAAG ACCTCGAGCG CGTCCGTCGC CTGCTGGAGG CCTGA
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Protein sequence | MTTAFTVVIP SRYASTRLPG KPLLDIAGKP MIQHVWEQAS KSSASRVVVA TDDARIVEAC KAFGAEVVLT REDHNSGTDR LAEVAAKLGL EPDAIVVNVQ GDEPLIPPSV IDQVAANLAA HTEARMATLA EPIEDVETLF NPNVVKVVSD LNGLALTFSR ATLPLARDAF AKRRDVLPEG VPYRRHIGIY AYRAGFLQDF VSWGPCWLEN TESLEQLRAL WHGVRIHVAD ALIAPPTGVD TAEDLERVRR LLEA
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