Gene Pfl01_4173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4173 
Symbol 
ID3712537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4711200 
End bp4711964 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content65% 
IMG OID 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_349901 
Protein GI77460394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.313523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.542836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CCTTCACCGT TGTCATCCCG TCGCGTTACG CCTCGACCCG TCTGCCGGGC 
AAGCCGCTGC TGGACATCGC CGGCAAGCCG ATGATCCAGC ACGTCTGGGA GCAGGCGAGC
AAAAGCAGCG CCAGCCGTGT GGTGGTGGCG ACCGACGATG CGCGGATTGT CGAGGCCTGC
AAGGCCTTCG GCGCCGAAGT GGTGCTGACC CGTGAAGATC ACAACTCCGG CACCGATCGT
CTGGCTGAAG TGGCTGCCAA GCTGGGTCTG GAGCCGGATG CCATCGTGGT CAACGTGCAG
GGTGACGAAC CGCTGATCCC GCCGAGCGTG ATCGATCAGG TCGCCGCCAA CCTCGCGGCC
CACACCGAAG CGCGCATGGC CACCTTGGCC GAGCCGATCG AAGACGTGGA AACCTTGTTC
AACCCGAACG TGGTCAAGGT CGTCAGCGAC CTCAACGGTC TGGCGCTGAC CTTCAGTCGC
GCGACCCTGC CATTGGCTCG CGATGCGTTC GCCAAGCGCC GCGACGTGCT GCCGGAAGGC
GTACCGTATC GTCGCCACAT CGGCATCTAT GCCTACCGCG CCGGTTTCCT TCAGGACTTT
GTGAGCTGGG GCCCGTGCTG GCTGGAAAAC ACCGAATCCC TCGAACAACT GCGTGCCCTG
TGGCACGGCG TGCGGATTCA TGTGGCGGAC GCGTTGATCG CGCCGCCGAC CGGGGTCGAC
ACCGCCGAAG ACCTCGAGCG CGTCCGTCGC CTGCTGGAGG CCTGA
 
Protein sequence
MTTAFTVVIP SRYASTRLPG KPLLDIAGKP MIQHVWEQAS KSSASRVVVA TDDARIVEAC 
KAFGAEVVLT REDHNSGTDR LAEVAAKLGL EPDAIVVNVQ GDEPLIPPSV IDQVAANLAA
HTEARMATLA EPIEDVETLF NPNVVKVVSD LNGLALTFSR ATLPLARDAF AKRRDVLPEG
VPYRRHIGIY AYRAGFLQDF VSWGPCWLEN TESLEQLRAL WHGVRIHVAD ALIAPPTGVD
TAEDLERVRR LLEA