Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4172 |
Symbol | |
ID | 3712536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4710736 |
End bp | 4711200 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | protein tyrosine phosphatase |
Protein accession | YP_349900 |
Protein GI | 77460393 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.207146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.309722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTTC TGTTCGTGTG CCTGGGCAAC ATCTGCCGTT CGCCCACCGC CGAAGGCGTG TTGCGCCACA AGTTGCGCGA AGCGGGGCTG GCGGATCAGG TCGAAGTGGC TTCCGCCGGC ACCGGTGACT GGCACGTCGG CAATCCGCCG GACAAGCGCA GTCAGGCTGC GGCCAAGCTG CGCGGTTATG ACCTGTCGGC GCAACGCGCG CAGCAGGTCA GCCGCGCCGA TTTCGCCAGT TACGACCTGA TCCTTGCCAT GGACAACAGC AACCTGCGCA ACCTCAAGGC CTTGCAACCG TCCACCGGCA AGGCCGAGCT GGACCTGTTT CTGCGCCGCT ATGCAGGCGT GGTCGACGAG GTGCCGGATC CGTACTACGA CGGCGATCAG GGTTTCGAGC AGGTGCTGGA TCTGATCGAG CGTGCCTGCG ATCAGTTGCT GATCGAAGTG AAGGGGCGGT TATGA
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Protein sequence | MRVLFVCLGN ICRSPTAEGV LRHKLREAGL ADQVEVASAG TGDWHVGNPP DKRSQAAAKL RGYDLSAQRA QQVSRADFAS YDLILAMDNS NLRNLKALQP STGKAELDLF LRRYAGVVDE VPDPYYDGDQ GFEQVLDLIE RACDQLLIEV KGRL
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