| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4166 |
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| Symbol | |
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| ID | 3714931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 4701795 |
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| End bp | 4705043 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | RNAse E |
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| Protein accession | YP_349894 |
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| Protein GI | 77460387 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000306864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.124166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA TGCTGATTAA CGCAACTCAA CCCGAAGAGT TGCGTGTTGC ACTGGTAGAT
GGCCAGCGCC TCTACGACCT GGACATCGAA TCCGGTGCAC GCGAGCAGAA GAAGGCCAAC
ATCTATAAAG GCCGCATCAC TCGCATCGAA CCAAGCCTTG AGGCTGCCTT TGTCGATTTC
GGCTCCGAGC GCCACGGCTT CCTGCCCCTC AAAGAAATCT CCCGCGAATA CTTCAAGAAA
GCCCCTGAAG GCCGCGTCAA CATCAAGGAC GTCCTGAGCG AAGGCCAGGA AGTCATCGTT
CAGGTCGAAA AAGAAGAACG TGGCAACAAG GGCGCAGCCC TGACCACCTT CATCAGCCTG
GCCGGTCGTT ACCTCGTTCT GATGCCGAAC AACCCGCGTG CCGGCGGCAT CTCCCGTCGC
ATCGAAGGCG AAGAGCGCAA CGAACTGCGT GAAGCGCTGA ACGGCCTGGT CGCGCCAGCC
GACATGGGTC TGATCGTGCG CACTGCAGGC CTTGGCCGCA GCAGCGAAGA AATGCAGTGG
GACCTCGATT ACCTGCTGCA ACTCTGGACC GCTATCAAGG AAGCCTCGCT GGATCGTTCC
GCGCCATTCC TGATCTACCA GGAAAGCAAC GTGATCATCC GCGCGATCCG CGATTACCTG
CGCCAGGACA TCGGCGAAGT GCTGATCGAC AGTGTTGAAG CCCAGGACGA AGCCCTGACC
TTCATCCGCC AGGTGATGCC GCAGTACGCC AGCAAGATCA AGCTGTATGA AGACAGCGTT
CCGCTGTTCA ACCGTTTCCA GATCGAAAGC CAGATCGAGA CCGCTTTCCA GCGCGTCGTC
GAACTGCCGT CCGGCGGCTC CATCGTCATC GATCCGACCG AAGCCCTGGT GTCCATCGAC
ATCAACTCGG CGCGCGCCAC CAAAGGCAGC GACATCGAAG AAACCGCCCT GCAGACCAAC
CTTGAAGCCG CCGAAGAAAT CGCCCGTCAG TTGCGCCTGC GCGACATCGG CGGCCTGATC
GTCATCGACT TCATCGACAT GACCCCTGCC AAGAACCAGC GCGCCGTGGA AGAGAAAGTC
CGCGAATGCC TGGAAGCCGA CCGCGCTCGC GTGCAGATCG GTCGCATCTC GCGCTTCGGC
CTGCTGGAAA TGTCCCGTCA GCGCCTGCGT CCTTCGCTGG GCGAAAGCAG CGGCATCGTC
TGCCCGCGTT GCAGCGGCAC CGGCATCATC CGTGACGTCG AATCCCTGTC CCTGGCGATC
CTGCGCCTGA TCGAAGAAGA AGCCCTGAAA GACCGTACCG CCGAAGTTCG CGCTCAAGTG
CCGATCCCGG TGGCCGCGTT CCTGCTCAAC GAAAAACGCA ACTCGATCAC CAAGATCGAA
CTGCGCACCC GCGCCCGCAT TGTCATCCTG CCGAACGATC ACCTCGAAAC CCCGCATTTC
GAAGTTCAGC GTCTGCGTGA CGACAGCCCG GAAGCCGCGA CCAACCAGTC CAGCTACGAA
ATCGCTGCCG CCGCTGCCGA TGTCGAAGAC GTTCAGCCAG CCGCCGCGAC CCGCACCCTG
GTTCGCCAGG AAGCCGCGGT CAAGACCGCT CCGGCTCGCG CCAACGCTCC GGTTCCGACC
GAAGTCGCCG CACCGGCCCC GGCACCTGCT CCGGTTGCCG CGCCAGAGCC AAGCCTGTTC
AAAGGCCTGG TGAAGTCGCT GGTCAGCCTG TTCGCCACCA AGGAAGAGCC AGTTGCTCCG
GTGGTGGTTG AAAAACCTGC CACCGAGCGT CCGGCCCGCA ACGAAGAGCG TCGCAACGGT
CGTCAGCAGA GCCGTAACCG TAACGGTCGC CGCGATGAAG AACGCAAACC GCGCGAAGAA
CGTGCACCGC GTGAAGAGCG CGCACCACGT GAGCCGCGTG AAGAGCGTCA GCCGCGCGAG
CCACGTGAAG TCCGCGAGCC ACGTGAAGTC CGCGAGCCAC GCGAATCCCG TGACGAAGCA
CCGGTAGCCC GCGAAGAACG CGCACCACGC GCCCCTCGTG AAGAACGTGC ACCACGTGCT
CCGCGTGAAG ATCGCAAGCC GCGTGGCGAG CGTGAAGAAC GCGTACGTGA ACTGCGCGAG
CCGCTGGATG CCGCTCCGGC AGTTGCTGCC GCCGCCACCG CTGAAGAGCG TCCGGCCCGT
CAGCCACGTG AAGAGCGTGC GCCACGTCCT CCGCGCGAAG AGCGTCAACC GCGCGCCGAA
CAGGCCGCTG CTGCCGTCGC TGAAGAAGAA ATCACCACCA ACGAAGAGCA ACTGCCGGAA
GACGGTTCGG AGAACGCCGA AGGCGATCGT CCACGCCGCC GCTCCCGTGG TCAGCGTCGT
CGCAGCAACC GTCGCGAGCG TCAGCGTGAT GCCAACGGCA ACGTGATCGA AGGTTCGGAA
GAGTCCGAGT CCGGCGAAAA CGCCCAGGCG CCAAGCACTG CCGATCTGGC TGCTGGTCTG
GCTGTTACCG CTGCTGTTGC CAGCACCGTG ATCAGCGCTC CGGCTGAAGC TCAGGCCCAC
GAGCAAGCTG AACGCGCCAC CGCTGCAACC CTGGAAACTG CTCCAGTAGA AGCGCCGGTT
GTTGAAGCAA CCACTCCGGT AGAAGCAGCT GCCGCTCCGG AAGTCGAAGT GGCTCCGGTT
CGCGAAGCTC AGCCTCAGGT TGAAGCAGCT GCCGAACCAG CGGTGACCTT CGAAGCACCA
GCCGTAGTTG AAGAGTCGGT TGTCGAAACC GGCGCTGAAA CCGTGACCGA AACCGTGCGT
GAAGTTCGCG AAGAACAGAC CGCGTTCAAC TGGGTCGCCG AGCCGGCTGT CACTGAAACA
CCAGCGCCAG TGGTTGAAGC GCCTGTTGTT GAAGAAGCCA AGGCTGCCGA GCCAGTGGTG
GTTGCCGAAC CGACTCCTGT CGCAGAAGCA CCGGTCATCG AGGCGCCAGT GGTTGCCGAA
GCGCCAGCCC CTGTGGTTGA AGCTGCTCCG GTCAGCGCCC TGACCCCAAG CGGCCGCGCG
CCGAACGACC CGCGTGAAGT GCGTCGTCGC AAGCGTGAAG AAGAGCGTCT GCAGAAGGAA
GCCGAACTGG CTGCCGCTGC CGCCGCTGCT GCTCCAGCTG CCGAAGTGGT CGAGGCGGCT
CCTGCCCCGG TCGCTGAGGA AGTGGCCGTT GAAGCCGTGA TTGCCGAAGC ACCACGCTCC
GTTCAGGAAG CGGTCGAGCA ACACGCAGAG GCTCAGGAAA AAGAACACGA GCCTAAACCC
CTCGTCTGA
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| Protein sequence | MKRMLINATQ PEELRVALVD GQRLYDLDIE SGAREQKKAN IYKGRITRIE PSLEAAFVDF
GSERHGFLPL KEISREYFKK APEGRVNIKD VLSEGQEVIV QVEKEERGNK GAALTTFISL
AGRYLVLMPN NPRAGGISRR IEGEERNELR EALNGLVAPA DMGLIVRTAG LGRSSEEMQW
DLDYLLQLWT AIKEASLDRS APFLIYQESN VIIRAIRDYL RQDIGEVLID SVEAQDEALT
FIRQVMPQYA SKIKLYEDSV PLFNRFQIES QIETAFQRVV ELPSGGSIVI DPTEALVSID
INSARATKGS DIEETALQTN LEAAEEIARQ LRLRDIGGLI VIDFIDMTPA KNQRAVEEKV
RECLEADRAR VQIGRISRFG LLEMSRQRLR PSLGESSGIV CPRCSGTGII RDVESLSLAI
LRLIEEEALK DRTAEVRAQV PIPVAAFLLN EKRNSITKIE LRTRARIVIL PNDHLETPHF
EVQRLRDDSP EAATNQSSYE IAAAAADVED VQPAAATRTL VRQEAAVKTA PARANAPVPT
EVAAPAPAPA PVAAPEPSLF KGLVKSLVSL FATKEEPVAP VVVEKPATER PARNEERRNG
RQQSRNRNGR RDEERKPREE RAPREERAPR EPREERQPRE PREVREPREV REPRESRDEA
PVAREERAPR APREERAPRA PREDRKPRGE REERVRELRE PLDAAPAVAA AATAEERPAR
QPREERAPRP PREERQPRAE QAAAAVAEEE ITTNEEQLPE DGSENAEGDR PRRRSRGQRR
RSNRRERQRD ANGNVIEGSE ESESGENAQA PSTADLAAGL AVTAAVASTV ISAPAEAQAH
EQAERATAAT LETAPVEAPV VEATTPVEAA AAPEVEVAPV REAQPQVEAA AEPAVTFEAP
AVVEESVVET GAETVTETVR EVREEQTAFN WVAEPAVTET PAPVVEAPVV EEAKAAEPVV
VAEPTPVAEA PVIEAPVVAE APAPVVEAAP VSALTPSGRA PNDPREVRRR KREEERLQKE
AELAAAAAAA APAAEVVEAA PAPVAEEVAV EAVIAEAPRS VQEAVEQHAE AQEKEHEPKP
LV
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