| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4154 |
|---|
| Symbol | |
|---|
| ID | 3714919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4691575 |
|---|
| End bp | 4692390 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | 4-amino-4-deoxychorismate lyase |
|---|
| Protein accession | YP_349882 |
|---|
| Protein GI | 77460375 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0929284 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGCT GGGTCGACGG TCTGCCGGCT GACGCTCTGT CGCTGAAAGA TCGCGGCCTG
GCTTACGGCG ACGGTCTGTT CGAGACCATC GCCGTGCGAG GTGGCCAGCC ATTGCTGCTG
GATCGGCATC TGACGCGTCT GGCCGACGGC TGTGCACGTC TGGCCATTGC CGCCGACATC
GAGCGGGTTC GCCATGAGCT GCAATCCTAT GCCGCCGCGA TGGGTGAGGG CGTGCTCAAA
CTCATCCTCA CCCGTGGCGA CGGATTGCGC GGTTATGCAC CGGATCCTTC GGCGCAGGGC
CGACGCATTC TGCAAGGCAA TCCTCCCGCC GCTTACCCGG CTGCCTACGC CGAGCAGGGC
GTTCGCCTTT TCCCGTGCAG CACGCGTTTG TCGATTCAGC CGTTGCTTGC CGGGCTCAAA
CACCTCAATC GACTGGAGCA GGTCATTGCC CGCGCCGAAT GGCAGGACAG TGAGCATGCC
GAAGGTTTGA TGCTCGACCA GGCCGGTCGG GTAATCGAAG GTGTGTTCAG CAATCTGTTT
CTGGTGCGTG ACGGTGTGCT GATCACGGCG GACCTGAAAC GCTGCGGCGT AGCCGGTGTG
ATGCGCGCAG AAATATTGTT TCAGGCCAAG TCCCTGGGCA TTCCCGTACA AATCACCGAC
ATCCCCCTCG AACAGCTGCA ATGGGCCGAT GAAGTCTTTG TCTGCAATAG CGTGTATGGC
GTCTGGCCGG TACGCGCCTG TGCTGCTCTG AGCTGGCCGG TTGGCCCGCT CACCCGTAAA
CTGCAAACCA TTGCCCGCGC GCTACTGGAT GCCTGA
|
|---|
| Protein sequence | MDCWVDGLPA DALSLKDRGL AYGDGLFETI AVRGGQPLLL DRHLTRLADG CARLAIAADI
ERVRHELQSY AAAMGEGVLK LILTRGDGLR GYAPDPSAQG RRILQGNPPA AYPAAYAEQG
VRLFPCSTRL SIQPLLAGLK HLNRLEQVIA RAEWQDSEHA EGLMLDQAGR VIEGVFSNLF
LVRDGVLITA DLKRCGVAGV MRAEILFQAK SLGIPVQITD IPLEQLQWAD EVFVCNSVYG
VWPVRACAAL SWPVGPLTRK LQTIARALLD A
|
|---|
| |