Gene Pfl01_4149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4149 
Symbol 
ID3712631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4687562 
End bp4688347 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID 
ProductTatD-like deoxyribonuclease 
Protein accessionYP_349877 
Protein GI77460370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTAG ATTCCCATTG TCATCTTGAT CGCCTCGACC TCGCTGCTCA CGACGGTTCC 
CTGGATGCCG CGCTGGATGC GGCCCGCGAA CGCGGCGTCG GGCATTTCCT GTGCATCGGC
GTCAGCGCCG ACAACGCGGC CGATGTCAAA GCCTTGGCCG AGCGTTACGA CGACGTCGAT
TGCTCGGTCG GCGTGCATCC GCTGGATGTG CAGCCGGGCG CGGCGCCGGC GCTGGACTGG
CTGCTGCACG AGCTCAATCA CCCGAAAGTG GTAGCGATCG GTGAAACCGG TCTGGACTAT
CACTATGAGC CGGAAGCCGC CGAGCTGCAG CAGGAATCGT TCCGATTGCA CCTGCAAGCT
GCGCAGCAGA CCGGCAAACC GGTGATCATC CACACCCGTG GCGCCCGCGC CGACACACTC
GAACTTTTGC GCGAAGCCGC GTTGCCTCAG GCGGGTGTGC TGCATTGCTT CACCGAAGAC
TGGGAAATGG CCAAGGTGGC ACTGGACATG GGTTATTACA TTTCCCTGTC GGGCATCGTC
ACCTTCCGCA ACGCCGATGC GTTGCGCGAT GTGGCGAGCA AGGTTCCGGC CGATCGGCTG
CTGGTTGAGA CCGATTCGCC GTATCTGGCG CCGATCCCGT ATCGCGGCAA ACCGAACCTG
CCGCAATACG TGCGGGAAGT GGCAGAGTTT CTGGCGATGC TGCGCGGCGA GAACTATGAG
CGTTTTGCCG AGCAGACCAC CGAGAACTTC AAGCGACTGT TTCCGCTGGC GAATGTAAAA
GCCTGA
 
Protein sequence
MLVDSHCHLD RLDLAAHDGS LDAALDAARE RGVGHFLCIG VSADNAADVK ALAERYDDVD 
CSVGVHPLDV QPGAAPALDW LLHELNHPKV VAIGETGLDY HYEPEAAELQ QESFRLHLQA
AQQTGKPVII HTRGARADTL ELLREAALPQ AGVLHCFTED WEMAKVALDM GYYISLSGIV
TFRNADALRD VASKVPADRL LVETDSPYLA PIPYRGKPNL PQYVREVAEF LAMLRGENYE
RFAEQTTENF KRLFPLANVK A