Gene Pfl01_4140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4140 
SymbolaraG 
ID3712622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4678615 
End bp4680159 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content63% 
IMG OID 
ProductL-arabinose transporter ATP-binding protein 
Protein accessionYP_349868 
Protein GI77460361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCGC AAGTACAGAC ACAAGAACAC AGCGCCAGCG GCAGCCTGCG TTTCAACGGG 
ATCGGCAAGA CCTTCCCGGG CGTGAAGGCG CTGGACGGCA TCAGTTTCGT CGCGCATCCC
GGGCAGGTTC ACGCCTTGAT GGGCGAGAAC GGCGCCGGCA AATCGACCCT GCTGAAAATC
CTCGGTGGCG CCTACATTCC GAGCAGCGGC GAGCTGCAGA TCGGCGAGCA GACGATGGCC
TTCAAGTCCA CTGCCGACAG CATCGGCAGC GGCGTGGCGG TGATTCACCA GGAACTGCAT
CTGGTGCCGG AAATGACCGT GGCGGAGAAC CTGTTTCTCG GTCACCTGCC GGCCAGTTTC
GGCCTGATCA ATCGCGGCGC GCTGCGCCAG CAAGCCTTGG CTTGCCTCAA AGGCCTGGCC
GATGAAATCG ACCCGCAGAC CAAGGTCGGA CGCCTGTCCC TCGGTCAGCG GCAACTGGTG
GAAATCGCCA AGGCGCTGTC CCGTGGCGCG CACGTGATTG CCTTCGACGA ACCGACCAGC
AGCCTCTCGG CTCGGGAAAT CGACCGGTTG ATGGCGATCA TCGGCCGGCT GCGTGACGAG
GGCAAAGTAG TGCTCTACGT CTCCCATCGC ATGGAAGAAG TGTTCCGCAT CTGCGACGCG
GTGACGGTGT TCAAGGACGG TCGCTACGTG CGCACCTTCG ACGACATGAG CCAGTTGACC
CACGATCAAC TGGTGACCTG CATGGTCGGT CGCGACATTC AGGACATCTA CGATTATCGC
GGTCGCCCGC GCGGTGCCGT GGCGCTGAGA GTCGATGGCT TGCTCGGCCC GGGCCTGCGC
GAGCCGATCA GTTTCGATGC GCACAAGGGC GAGATTCTGG GCCTGTTCGG GCTGGTCGGG
GCAGGGCGCA CCGAGCTGTT CCGGCTGCTC AGCGGTCTGG AGCGCAACAC CGCCGGACGC
CTGGAATTGC GCGGCCATGA ACTGAAGCTG CGTTCGCCCC GCGATGCGAT TGCCGCCGGG
ATTCTGCTAT GCCCGGAGGA TCGCAAGAAG GAAGGCATCA TTCCGCTCGC CAGTGTCGCC
GAGAACATCA ACATCAGTGC GCGCGGTGCG CATTCCGGGC TCGGCTGCCT GCTGCGCGGG
ATTTGGGAAA AGGGCAACGC CGAGAAACAG ATCAAGGCCC TGAAAGTGAA AACGCCCCAC
GCCGGGCAAC AGATCAAGTT CCTGTCCGGC GGCAATCAGC AGAAGGCGAT TCTCGGCCGC
TGGCTGTCGA TGCCGATGAA AGTCCTGCTG CTCGACGAGC CGACCCGGGG TATCGACATC
GGCGCCAAGG CCGAGATCTA CCAGATCATC CATAACCTGG CCGCCGACGG TATTTCGGTA
ATCGTGGTGT CCAGCGATCT GATGGAAGTG ATGGGTATTT CCGACCGCAT TCTGGTGCTG
TGCGAGGGCG CCTTGCGTGG CGAAGTCAGC CGCGACCAGG CCAACGAATC CAACCTGCTG
CAACTGGCTT TGCCGCGCCA CCGCGCTGAC GGCGTGGCGA ACTGA
 
Protein sequence
MHAQVQTQEH SASGSLRFNG IGKTFPGVKA LDGISFVAHP GQVHALMGEN GAGKSTLLKI 
LGGAYIPSSG ELQIGEQTMA FKSTADSIGS GVAVIHQELH LVPEMTVAEN LFLGHLPASF
GLINRGALRQ QALACLKGLA DEIDPQTKVG RLSLGQRQLV EIAKALSRGA HVIAFDEPTS
SLSAREIDRL MAIIGRLRDE GKVVLYVSHR MEEVFRICDA VTVFKDGRYV RTFDDMSQLT
HDQLVTCMVG RDIQDIYDYR GRPRGAVALR VDGLLGPGLR EPISFDAHKG EILGLFGLVG
AGRTELFRLL SGLERNTAGR LELRGHELKL RSPRDAIAAG ILLCPEDRKK EGIIPLASVA
ENINISARGA HSGLGCLLRG IWEKGNAEKQ IKALKVKTPH AGQQIKFLSG GNQQKAILGR
WLSMPMKVLL LDEPTRGIDI GAKAEIYQII HNLAADGISV IVVSSDLMEV MGISDRILVL
CEGALRGEVS RDQANESNLL QLALPRHRAD GVAN