| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4119 |
|---|
| Symbol | |
|---|
| ID | 3714961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4660797 |
|---|
| End bp | 4661687 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_349847 |
|---|
| Protein GI | 77460340 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.320929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.488195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTGA CCCGTCACCT TGATGCCAAC GCCACCCTGG TTTCGCTGAT CGAACCGCTG
GCGCTGCGCG ATGGTTACAG CCAGACCGGG CTGCCAGGCG TGCAGGTGTT GCGCGCCAGT
TGCGACGTCG CCCGTGGCCC GCACATTTAT GAGCCGAGCC TGATGATCAT CGCCCAGGGC
AGCAAACTGG CGTATCTGGG GCCGCGCACC ATGGAATACG GCGCCGGGCA TTACCTGATT
CAGGCTTTGC CGGTGCCCTT TGAGTGCGAG ACCTACGCGT TGCCGGACGC ACCGCTGCTT
GGCGTATCGG TGGCGATCGA CCGGGTGCTG CTCGGTGAAC TGGTGCTGGC CATGGGGCTG
GCGCCGGGGC GGCATATTCC GGCGCAGACA CCTGAGTCGA TGACCTCGGT GGTGCTCGAC
GATGACATGC GCGGATGCGT CGAGCGCTTG CTGCGTTGTC TGCACGATCC GCTGGAATGC
CAGATTCTCG GACCGGCGCG GGTGCGGGAG TTGTTGTTCG TCGCGTTGCG CGGTCCCCAG
GCCGATGTGC TGCGAGCGCT GGTGGAGCAG CAGGGGCAGT TCGCCCGGGT GGCGGCTTCG
ATCAGTCATC TGCATGCGCA TTACACCGAA CCGTTGAACG TCGAGACATT GGCCAGTTGC
GCGAACATGA GCGTTTCGAC CTTTCACGAA CACTTCAAAC GCAGCACGTT GCTGTCGCCG
GTGCAGTACC TGAAGCGTTT GCGCTTGTTG AAGGCGCAGA CGTTGTTGAT CGCCGAAGGA
CTGGGAGTGG CGCAGGTGGC GCATCGGGTG GGATACCAGA GCACGTCGCA GTTCAGTCGC
GAATACAAAC GCTATTTCGA ACGCAGTCCG GGGGATGAGC GTGCTGCGTG A
|
|---|
| Protein sequence | MQLTRHLDAN ATLVSLIEPL ALRDGYSQTG LPGVQVLRAS CDVARGPHIY EPSLMIIAQG
SKLAYLGPRT MEYGAGHYLI QALPVPFECE TYALPDAPLL GVSVAIDRVL LGELVLAMGL
APGRHIPAQT PESMTSVVLD DDMRGCVERL LRCLHDPLEC QILGPARVRE LLFVALRGPQ
ADVLRALVEQ QGQFARVAAS ISHLHAHYTE PLNVETLASC ANMSVSTFHE HFKRSTLLSP
VQYLKRLRLL KAQTLLIAEG LGVAQVAHRV GYQSTSQFSR EYKRYFERSP GDERAA
|
|---|
| |