| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4118 |
|---|
| Symbol | |
|---|
| ID | 3714960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4659066 |
|---|
| End bp | 4660730 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | electron transfer flavoprotein-ubiquinone oxidoreductase |
|---|
| Protein accession | YP_349846 |
|---|
| Protein GI | 77460339 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.186712 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.300582 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACGCG AATACATGGA ATTCGACGTG GTCATCGTCG GTGCCGGCCC CGCTGGCCTG
TCCGCCGCCT GCCGTCTGAA GCAGAAGGCC GCCGAAGCCG GTAAGGAAAT CAGCGTCTGC
GTGGTCGAAA AAGGCTCCGA AGTCGGCGCA CACATCCTGT CCGGTGCCGT ATTCGAACCA
CGGGCCCTGA ACGAACTGTT CCCGGACTGG AAAGAACTCG GCGCCCCGCT GAACACGCCA
GTCACCCGCG ATGACATCTT CGTGCTGAAA AACGCCGAAA GCGCGCAAAA AATTCCTGAC
TTCTTTGTGC CCAAGACCAT GCACAACGAA GGCAACTACA TTATCTCCCT CGGCAACCTG
TGCCGCTGGC TCGCTCAGCA GGCCGAAAAC CTGGGCGTGG AAATCTACCC GGGCTTCGCC
GCTCAGGAAG CGCTGATCGA TGAAAACGGC GTGGTGCGCG GGATCATCAC CGGCGACCTC
GGCGTCGACC GCGAAGGCCA TCCGAAAGAA GGCCTGTACA CCCCGGGCAT GGAACTGCGT
GGCAAGTACA CGCTGTTCGC CGAAGGTTGC CGTGGCCACA TCGGCAAGCA ACTGATCAAG
CGCTATAACC TGGACAGCGA TGCCGACGCC CAGCACTACG GCATCGGGCT GAAGGAAATC
TGGGAAATCG ACCCGGCCAA ACACCAGCCA GGCCTGGTGG TGCACACCGC CGGTTGGCCG
ATGGACATCA TGGGCACCGA GAACACCGGC GGCTCCTTCC TCTATCACCT GGAAAACAAC
CAGGTGGTGG TCGGTCTGAT CGTCGACCTT TCCTACAGCA ACACCTACCT GTCGCCGTTC
GACGAATTCC AGCGCCTCAA GCATCACCCG GTACTCAAGC AGTATCTGGA AGGCGGCAAG
CGCATCAGCT ACGGCGCACG TGCGATCTGC AAGGGTGGCC TGAACTCACT GCCGAAAATG
GTCTTCAAGG GCGGCGCACT GATCGGTTGC GACCTCGGCA CTCTGAACTT CGCCAAGATC
AAAGGCAGCC ACACCGCGAT GAAGTCCGGC ATGCTCGCCG CTGAATCCGT GGCCGACGCG
CTGTTCGCTG AAAAGGACGG CACGGAAGAG CTGACCACCT ACGTCGACGC CTTCAAGAAG
AGCTGGCTCT ACGAAGAACT GTTCGCCAGC CGCAACTTCG GCCCGGCGAT CCACAAGTTC
GGCGCTATCG TCGGCGGCGG TTTCAACTGG CTGGACCAGA ACATCTTCGG CGGCAAACTG
CCGTTCACCC TGCACGACAC CAAGCCGGAC TACGCCTGCC TCAAGCTCGC GGCCGACTGC
AAGAAGATCG ACTACCCGAA ACCCGACGGC AAGATCAGCT TCGACAAGCT GAGCTCGGTG
TTCATCTCCG GTACCAACCA TGAAGAAGAA CAGCCGTGCC ACCTGAAACT GACCGATCCG
ACCATCCCGC TGAGCAAGAA CCTGCCGCTG TACGACGAGC CGGCGCAGCG CTACTGCCCG
GCCGGCGTGT ATGAAGTGAT CACCAAGGAA GACGGCGAGA AGCGCTTCCA GATCAACGCC
CAGAACTGCG TGCACTGCAA GACCTGTGAC ATCAAGGATC CTTCGCAGAA CATCACCTGG
GTGACGCCGG AAGGCGCTGG CGGTCCGACC TATCCAAACA TGTAA
|
|---|
| Protein sequence | MEREYMEFDV VIVGAGPAGL SAACRLKQKA AEAGKEISVC VVEKGSEVGA HILSGAVFEP
RALNELFPDW KELGAPLNTP VTRDDIFVLK NAESAQKIPD FFVPKTMHNE GNYIISLGNL
CRWLAQQAEN LGVEIYPGFA AQEALIDENG VVRGIITGDL GVDREGHPKE GLYTPGMELR
GKYTLFAEGC RGHIGKQLIK RYNLDSDADA QHYGIGLKEI WEIDPAKHQP GLVVHTAGWP
MDIMGTENTG GSFLYHLENN QVVVGLIVDL SYSNTYLSPF DEFQRLKHHP VLKQYLEGGK
RISYGARAIC KGGLNSLPKM VFKGGALIGC DLGTLNFAKI KGSHTAMKSG MLAAESVADA
LFAEKDGTEE LTTYVDAFKK SWLYEELFAS RNFGPAIHKF GAIVGGGFNW LDQNIFGGKL
PFTLHDTKPD YACLKLAADC KKIDYPKPDG KISFDKLSSV FISGTNHEEE QPCHLKLTDP
TIPLSKNLPL YDEPAQRYCP AGVYEVITKE DGEKRFQINA QNCVHCKTCD IKDPSQNITW
VTPEGAGGPT YPNM
|
|---|
| |