Gene Pfl01_4106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4106 
Symbol 
ID3712410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4647806 
End bp4648693 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content61% 
IMG OID 
Productshort chain dehydrogenase 
Protein accessionYP_349834 
Protein GI77460327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.779242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.448814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGTG GGTCGCCCCG TATCCTTCGC TACACTCCGC GCATCTTCCC CGGAACAACA 
AGGCTGTCTG CTATGCAAAA TCGCATGATG ATCACTGGCG CGGGCTCAGG CCTGGGTCGC
GAAATCGCGC TGCGCTGGGC GCGTGAAGGC TGGCAACTGG CCTTGTCCGA CGTCAGCGAG
CCCGGTTTGC AAGAGACCCT GAAGCTGGTT CGCGAGGCCG GCGGCGACGG CTTCATCCAG
CGCTGCGACG TGCGCGATTA CAGCCAGCTG ACCGCGTTTG CCCAGGCTTG CGAAGTGAAA
CTTGGCGGCA TCGACATCAT CGTCAACAAC GCCGGTGTCG CCTCGGGCGG TTTCTTCAGC
GAGCTGTCGC TGGAGGACTG GGACTGGCAG ATCGCGATCA ACCTGATGGG CGTGGTCAAG
GGTTGCAAGG CGTTCCTGCC GCTGCTGGAG CAGAGCAAGG GCAAGATCAT CAATATCGCG
TCCATGGCCG CGCTGATGCA GGGCCCGGCG ATGAGTAACT ACAACGTGGC CAAGGCCGGG
GTAGTGGCGC TGTCGGAGAG CCTGTTGATC GAACTGGCCC AACAGGAAGT CGGGGTTCAT
GTGGTCTGCC CGTCGTTCTT CCAGACCAAT CTGCTGGATT CTTTCCGTGG CCCGACGCCG
GCGATGAAAA CCCAGGTCGG CAAGTTGCTG GAAAGTTCGC CGATCACCGC CAGCGATATT
GCCGATTACA TCTACAAGCA GGTCGCGGCC GGCGAGTTCA TGATCCTGCC CCACGAACAA
GGGCGCATGG CCTGGGCGCT CAAACAGAAG AATCCGCAGC TGCTGTACAA CGAAATGACC
GCAATGGCCG AAAAGATGCG CGCCAAGTCC AAACAGAACA ACGGCTGA
 
Protein sequence
MERGSPRILR YTPRIFPGTT RLSAMQNRMM ITGAGSGLGR EIALRWAREG WQLALSDVSE 
PGLQETLKLV REAGGDGFIQ RCDVRDYSQL TAFAQACEVK LGGIDIIVNN AGVASGGFFS
ELSLEDWDWQ IAINLMGVVK GCKAFLPLLE QSKGKIINIA SMAALMQGPA MSNYNVAKAG
VVALSESLLI ELAQQEVGVH VVCPSFFQTN LLDSFRGPTP AMKTQVGKLL ESSPITASDI
ADYIYKQVAA GEFMILPHEQ GRMAWALKQK NPQLLYNEMT AMAEKMRAKS KQNNG