| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4098 |
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| Symbol | mnmC |
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| ID | 3712402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 4634886 |
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| End bp | 4636865 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_349826 |
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| Protein GI | 77460319 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTG TAATGCCCCA CGCCCAACTC GACTGGGATG ACCAGGGACG CCCGCGTTCG
CGAGTGTTCG ACGATGTGTA TTTTTCCGAC CAGTCGGGGC TGGATGAAAC CCGCTACGTG
TTCCTTGAAC AGAACCGTCT GGCCGAGCGT TTTGCCGCGT TGTCGGCGGG TGGGCGACTG
GTGATCGGTG AAACCGGCTT CGGCACCGGG CTGAATTTTC TCTGCGCCTG GCAGTTGTTC
GAACAGCACG CGGTGGCCGG TGCGCGACTG CATTTTGTCA GCGTCGAAAA ATTTCCGTTG
AGCCCTGCCG ACCTGCAACG GGCGCTGGCG TTGTGGCCCG ACCTGAAGCG ATTCTCCGAT
CAGTTGCTCA AGCATTACGT GGCAATCCAT CAGGGATTTC AGCGCATTGT TCTGGATAAC
GGGCGCATAA CCCTGACCCT GTTGATCGGT GACGCGCTGG AGCAGTTGCC ACAACTGGAC
GGCCAGATCG ACGCCTGGTT TCTCGACGGT TTCGCGCCAG CGAAAAACCC CGAGATGTGG
ACCGCCGAAC TGTTCGCCGA ACTGGCCCGG CTGGCGGCAC CCGGCTCGAC CATCAGCACG
TTTACCAGCA CCGGTTGGGT GCGACGCCTG CTCAACGCCG CCGGCTTCAA GATGAAACGC
ACGCCGGGCA TCGGCCACAA ATGGGAAATC CTGCGCGGCG AATTTCTCGG CTGGCCCGAG
GGTGTTGCGC CACCTGCGGC GGCAAAACCG TGGTTCGCCC GCCCCACACG GTTGACAGGT
GACCGTCGAG CCCTGGTGAT CGGCGCCGGT CTGGCCGGTT GCGCCACGGC GGCCAGCCTC
GCGGCGCGGG GCTGGCAGGT CAGTCTGCTG GAACGGCATG ATGCGGTGGC CCAGGAAGCC
TCGGGTAACC CGCAAGGCGT TCTGTATCTG AAACTGTCCG CCCATGGCAC GGCACTTTCG
CAGTTGATCG TCAGCGGTTT CGGTTACACC CGGCGCGTGC TGGAAACCTT GCAGCGTGGC
ACCGACTGGG ATGATTGCGG GGTGCTGCAA CTGGCGTTCA ATGAGAAGGA GCGCGAGCGT
CAGGCACAAC TGGCATCCGC GTTTCCCGAA GACCTGCTGC AATGGCTCGA TCAACCCGAA
GCGCAGGCCC GTGCCGGAGT CGGTCTGGCT CACGGCGGTT TGTATTACCC CGAGGGTGGC
TGGGTACATC CGCCGGCGTT GTGTCAGGCG CAATCGGCAC AGCCGGGCGT CACACTGCTC
CCCCATCAGG AAGCCGTCGA GTTGCGCAAA GTGGGCGATC AATGGCAAGC CTTCGACGGT
GAACGATTGA TTGCAACAGC GCCCGTCGTG GTGCTGGCCG GTGCCGCCGA AATCAAGCGT
TTTGCCCAAA GCGGCGAGCT GCCCCTCAAG CGCATTCGCG GGCAGATCAC CCGCCTGGCG
CAGACTGCGC AAAGCCAGGC GCTGGCCACT GTCGTGTGTG CCGAAGGTTA TGTCGCACCG
GCACGATGGG GCGAGCACAC CCTCGGCGCC AGTTTCGACT TCAGCAGCGA CGACCTGACC
CCGACCACCG CCGAACACCT GGGCAATCTG GCGATGCTCG AAGAGATCTC CACCGATCTG
GTCGCGCGCC TGCACGTCAG CGAGCGCGAC GCCGAAAGTC TTCAGGGCCG GGCAGCCTTC
CGTTGCACCA GCCCCGATTA CCTGCCGATG GTCGGCCCGC TCGCCGACCG CGAAGCGTTT
ACCCGGATCT ACGCCGCATT GAGCAAGGAT GCACGGCAGG TGCCGGACAT GCCTTGTCCC
TGGCTCGACG GACTGTACGT CAACAGCGGT CATGGCTCCC GAGGTCTGAT CACCGCACCC
TTGTCCGGTG AACTGCTCGC GGCCTGGCTG GACAACGAAC CGCTGCCCCT GCCCAGAAGT
GTCGCAGAGG CGTGTCATCC GAACCGGTTT GCCTTGCGGC GACTGATCCG GGGCAAATGA
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| Protein sequence | MKPVMPHAQL DWDDQGRPRS RVFDDVYFSD QSGLDETRYV FLEQNRLAER FAALSAGGRL
VIGETGFGTG LNFLCAWQLF EQHAVAGARL HFVSVEKFPL SPADLQRALA LWPDLKRFSD
QLLKHYVAIH QGFQRIVLDN GRITLTLLIG DALEQLPQLD GQIDAWFLDG FAPAKNPEMW
TAELFAELAR LAAPGSTIST FTSTGWVRRL LNAAGFKMKR TPGIGHKWEI LRGEFLGWPE
GVAPPAAAKP WFARPTRLTG DRRALVIGAG LAGCATAASL AARGWQVSLL ERHDAVAQEA
SGNPQGVLYL KLSAHGTALS QLIVSGFGYT RRVLETLQRG TDWDDCGVLQ LAFNEKERER
QAQLASAFPE DLLQWLDQPE AQARAGVGLA HGGLYYPEGG WVHPPALCQA QSAQPGVTLL
PHQEAVELRK VGDQWQAFDG ERLIATAPVV VLAGAAEIKR FAQSGELPLK RIRGQITRLA
QTAQSQALAT VVCAEGYVAP ARWGEHTLGA SFDFSSDDLT PTTAEHLGNL AMLEEISTDL
VARLHVSERD AESLQGRAAF RCTSPDYLPM VGPLADREAF TRIYAALSKD ARQVPDMPCP
WLDGLYVNSG HGSRGLITAP LSGELLAAWL DNEPLPLPRS VAEACHPNRF ALRRLIRGK
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