Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4092 |
Symbol | |
ID | 3712396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4628398 |
End bp | 4628916 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_349820 |
Protein GI | 77460313 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.784057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGTC TTCGTGCCAT CTGCACCGCG GTTGCCCTGG TCTGCGCCAG CGGCCAGGTG CTTGCCGATA CCGCCAGCCA CAACGCCAGT GCCGAAACTT TCCTGACCCT GGCGCACGCT GACAAGCTGG GCACTCCGGT GTACATGCAG GTGCAGCAGA TGTTTGCCCA GCGTTTTGAA CAGACCAAGG CGCCGGAATC CAAGAAAGCC GTGCTGGATA CCTACCAGGC CAAGGCCAAC GCCGCTCTGG ACCAGGCCAT CGGCTGGAAC AAGCTGAAAC CGGACATGGT CAAGCTCTAC ACCAGCAACT TCAGCGAGCA GGAATTGAAA GATCTGGTCG CGTTCTACCA GTCGCCACTG GGCAAGAAAG TCCTGGAAAA AATGCCGCAA CTGACCCAGC AGTCGGCTCA GATGACCCAG GCCAAACTGG AAAGCGCCGT ACCGGTGGTC AACAAGTTGC TGGACGACAT GACCAACGAG CTGGCACCGA AAGGCGCAGC TCCAGCCAAG AAGAAGTAA
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Protein sequence | MTRLRAICTA VALVCASGQV LADTASHNAS AETFLTLAHA DKLGTPVYMQ VQQMFAQRFE QTKAPESKKA VLDTYQAKAN AALDQAIGWN KLKPDMVKLY TSNFSEQELK DLVAFYQSPL GKKVLEKMPQ LTQQSAQMTQ AKLESAVPVV NKLLDDMTNE LAPKGAAPAK KK
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