| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4086 |
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| Symbol | |
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| ID | 3712331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 4617739 |
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| End bp | 4620201 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_349814 |
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| Protein GI | 77460307 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAA AGCGGACTCT CGGAACGCCT CGGTTGTTGG GCATCGTCTG GCCATTCATC
GCCGTCGTGT TGTTTCAGGC GTTGCTGGGG GGCGTGAGTC TTTATGTCCT GTCGGCCGTT
CGCGGTTATG TGGCGGGCGA GAGCCTGTGG TCCAAGGGCC AGAAAGACGC CATCTATTAC
CTCAATCTGT ACGCCGACAG CCGCGACGAG GCGATCTACC TCAAGTACCA GAACGCGATT
GCCGTGCCTC AGGGCGGTCA TCAGTTGCGC CTGGCACTGG ACAAGCAACC GCCCGACCTG
CAAGCGGCGC GTGAGGGCAT TCTCAAGGGC GGCAACCACC CGGACGATGT CTCCAGCCTG
ATCTGGCTGT ACCTGAATTT CCGTCACTTC AGTTATCTGG AAATTGCCAT CGACCGCTGG
ACCCTGGGCG ACGCCTATCT GGTGGAACTT GATGGCGTGG CGCAGGAGAT GCATCAGCGC
ATCACTGCCA ATGCGGCGAC CGAGGCCGAT ATCCGCCGCT GGAAAGACCG GATCTTCGCG
ATCAACGACG GCGTGACCCC GGCCGCCAAG GCGTTCAGCG ATGCCCTGGG TGAAGGCTCG
CGGATGATTC TGCGTCTGCT GCTGTTTACC AACCTGGCCA CCGCACTGGG CCTGATCGTG
CTGGCGCTGC TGCGCACCCG CAAACTGCTC AAGCAGCGTC ATGCTTTCGC CGAAGCGTTG
CAACTGGAAA AAGATCGCGC GCATGTCACC CTGCATTCGA TTGGCGACGG TGTGATCACC
ACCGACGTGA GCGGGGCGAT CGACTACATG AATCCGGCCG CCGAAGCGTT GACCCACTGG
AAGGCCGAGC AGGCGTCCGG TCTGCCGCTG GCGGCGTTGT TCAATTTGCT GGATGACAAC
GCCCAGACGG AAGGGCTGAC CCTGATCGAG CACATTCTCA GTGGCCAGCT GACCGGCGGC
AGCGAACACT CGAAGCTGAT CCAGCGACTG GACGGCAGCA CGGTGTCGGT GACCCTGGTC
GGCGCGCCGA TCCGCAATGC CGGCAAGGTC AGTGGGGCGG TGCTGGTGCT GCATGACATG
ACCCAGGAGC GGCAATACAT CGCCAATCTG TCATGGCAGG CCACCCACGA TGCACTGACC
GGGCTGGCCA ATCGTCGCGA GTTCGAATAC CGGCTCGAAC AGGCGCTGCA CAACCTGACG
CGCCAGGCCG GGCGGCATGC GCTGATGTTC CTCGATCTGG ATCAATTCAA ACTGGTCAAT
GACACCTGCG GGCATGCGGC CGGCGATGAG TTGCTGCGGC ATATCTGCGC GTTGCTGCAA
TCGGGTTTGC GCGAAGGCGA CACTTTGGCT CGGCTGGGCG GCGACGAGTT TGGCATCCTG
CTGGAGAACT GCGCACCGGA GGCGGCGGAG AAGATCGCCG AGAGCCTGCG TCAGACCGTG
CAAAACCTGC ATTTTGTCTG GAAGGGGCGG CCATTCCTGA CCACCGTCAG TATCGGGCTG
GTGCACGTCG CTCAGAACCC GACCACTCTC GAAGCCTCGT TGCGGGCCGC CGATATGGCT
TGCTACATGG CCAAGGAAAA GGGTCGCAAC CGGGTGCAGG TCTACCATGC CGACGACTCG
GAATTGTCCC TGCGCTTTGG CGAGATGGCC TGGGTGCAAC GCCTGCACAT GGCCCTGGAA
GAAAACCGCT TCTGCCTCTA CGCCCAGGAA ATCGCCCCCT TGGGTTCGGC TGCCGGTGGC
ACTCGCGGAC ATATCGAAAT TCTGCTGCGT CTGCATGACG AAGCGGGCCG GATGATTCTG
CCGGACAGTT TCATACCAGC GGCGGAACGT TACGGTTTGA TGACCTCGCT GGATCGATGG
GTTGTGCAGA ATGTATTTAA GGTTATTGCT CAATGTATTA ACGATAAGTG CGAAGGCCCT
CTGGCAATGT GTGCGATTAA TCTTTCAGGC ATTACTATCG GAGATGACGC GTTCTTGCAC
TTCCTGCGAG AACAGTTTGA TAACTACGGC GTACCGCCTG AAATGATTTG TTTTGAAATT
ACAGAAACCA GTGCCATTGC AAATCTCGGG AGCGCAATCA GATTTATTAA TGAACTCAAA
GGCTTGGGCT GTTATTTCTC ACTGGATGAC TTTTGTGCCG GAATGTCTTC ATTCGCTTAT
CTGAAACATT TGCCTGTAGA CTTCCTGAAG ATCGACGGGA GTTTCGTAAA GGATATGCTG
GACGACCCGA TTAACCGTGC AATGGTCGAA GTGATCAATC ACATCGGGCA TGTCATGGGT
AAGCAGACAA TTGCCGAGTT TGTCGAAACA GCGCAGATCG AGCAGGCATT GCTTGAAATC
GGCGTGGATT ACGCTCAGGG TTATGTAGTG GAGCGTCCGC AGTTGTTTAC CTGTGACAGT
TTGCAAAGTC GGCCCGCCAG ACCGCAGCCG TTGTTATTCA AGGCGCCTGG CACGTTCCGT
TGA
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| Protein sequence | MKQKRTLGTP RLLGIVWPFI AVVLFQALLG GVSLYVLSAV RGYVAGESLW SKGQKDAIYY
LNLYADSRDE AIYLKYQNAI AVPQGGHQLR LALDKQPPDL QAAREGILKG GNHPDDVSSL
IWLYLNFRHF SYLEIAIDRW TLGDAYLVEL DGVAQEMHQR ITANAATEAD IRRWKDRIFA
INDGVTPAAK AFSDALGEGS RMILRLLLFT NLATALGLIV LALLRTRKLL KQRHAFAEAL
QLEKDRAHVT LHSIGDGVIT TDVSGAIDYM NPAAEALTHW KAEQASGLPL AALFNLLDDN
AQTEGLTLIE HILSGQLTGG SEHSKLIQRL DGSTVSVTLV GAPIRNAGKV SGAVLVLHDM
TQERQYIANL SWQATHDALT GLANRREFEY RLEQALHNLT RQAGRHALMF LDLDQFKLVN
DTCGHAAGDE LLRHICALLQ SGLREGDTLA RLGGDEFGIL LENCAPEAAE KIAESLRQTV
QNLHFVWKGR PFLTTVSIGL VHVAQNPTTL EASLRAADMA CYMAKEKGRN RVQVYHADDS
ELSLRFGEMA WVQRLHMALE ENRFCLYAQE IAPLGSAAGG TRGHIEILLR LHDEAGRMIL
PDSFIPAAER YGLMTSLDRW VVQNVFKVIA QCINDKCEGP LAMCAINLSG ITIGDDAFLH
FLREQFDNYG VPPEMICFEI TETSAIANLG SAIRFINELK GLGCYFSLDD FCAGMSSFAY
LKHLPVDFLK IDGSFVKDML DDPINRAMVE VINHIGHVMG KQTIAEFVET AQIEQALLEI
GVDYAQGYVV ERPQLFTCDS LQSRPARPQP LLFKAPGTFR
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