Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4085 |
Symbol | |
ID | 3712330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4616898 |
End bp | 4617692 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_349813 |
Protein GI | 77460306 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.667596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCGACA CATTCAACCG AACCGGACCA CTCATGGAAG CTGCAAGTTA TCCCGCCTGG GCGCAACAGT TGATCCAGGA TTGCAGCGAG AGCAAACGCC GGGTTGTCGA ACATGAACTT TATCTGCGCC TGCGTGATAA CAAGCTCAGC GCCAAAACCA TGCGCCAGTA CCTGATCGGG GGCTGGCCCG TCGTTGAGCA ATTCGCGTTG TACATGGCAC AGAATCTCAC CAAGACCAAA TTTGCCCGCC ACCCGGGTGA AGACATGGCG CGGCGCTGGT TGATGCGCAA TATTCGCGTC GAACTCAACC ACGCCGATTA TTGGCTGCAT TGGAGCCGGG CCCATGGGGT GAGCCTGGAA GATCTGCAGG CGCAGCAAGT ACCACCGGAG TTGCACGCCC TGAGCCACTG GTGCTGGCAC ACCAGTTCGG CGGATTCACT GATCGTGGCC ATCGCAGCCA CCAACTACGC CATCGAAGGC GCGACCGGGG AGTGGTCGGC GCTGGTGTGT TCGACGGGGG TCTATGCTGC GGCCTTCCCT GAAGAGGACC GCAAGCGGGC GATGAAGTGG CTGAAGATGC ACGCCCAGTA CGACGATGCC CATCCTTGGG AAGCGTTGGA GATCATCTGC ACCCTGGCCG GGATGAACCC GAGCAAAGCC TTGCAGGCGG AGCTGCGACA GGCCATCTGC AAGAGTTATG ACTACATGTA CCTGTTCCTC GAGCGCTGCA TGCAGCTCGA ACTGTCGGAG CGGGTGATGG TCGGGCGTGA GCGTCGGGCA CTGGTCGAGA GCTAG
|
Protein sequence | MIDTFNRTGP LMEAASYPAW AQQLIQDCSE SKRRVVEHEL YLRLRDNKLS AKTMRQYLIG GWPVVEQFAL YMAQNLTKTK FARHPGEDMA RRWLMRNIRV ELNHADYWLH WSRAHGVSLE DLQAQQVPPE LHALSHWCWH TSSADSLIVA IAATNYAIEG ATGEWSALVC STGVYAAAFP EEDRKRAMKW LKMHAQYDDA HPWEALEIIC TLAGMNPSKA LQAELRQAIC KSYDYMYLFL ERCMQLELSE RVMVGRERRA LVES
|
| |