Gene Pfl01_4085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4085 
Symbol 
ID3712330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4616898 
End bp4617692 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349813 
Protein GI77460306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.667596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGACA CATTCAACCG AACCGGACCA CTCATGGAAG CTGCAAGTTA TCCCGCCTGG 
GCGCAACAGT TGATCCAGGA TTGCAGCGAG AGCAAACGCC GGGTTGTCGA ACATGAACTT
TATCTGCGCC TGCGTGATAA CAAGCTCAGC GCCAAAACCA TGCGCCAGTA CCTGATCGGG
GGCTGGCCCG TCGTTGAGCA ATTCGCGTTG TACATGGCAC AGAATCTCAC CAAGACCAAA
TTTGCCCGCC ACCCGGGTGA AGACATGGCG CGGCGCTGGT TGATGCGCAA TATTCGCGTC
GAACTCAACC ACGCCGATTA TTGGCTGCAT TGGAGCCGGG CCCATGGGGT GAGCCTGGAA
GATCTGCAGG CGCAGCAAGT ACCACCGGAG TTGCACGCCC TGAGCCACTG GTGCTGGCAC
ACCAGTTCGG CGGATTCACT GATCGTGGCC ATCGCAGCCA CCAACTACGC CATCGAAGGC
GCGACCGGGG AGTGGTCGGC GCTGGTGTGT TCGACGGGGG TCTATGCTGC GGCCTTCCCT
GAAGAGGACC GCAAGCGGGC GATGAAGTGG CTGAAGATGC ACGCCCAGTA CGACGATGCC
CATCCTTGGG AAGCGTTGGA GATCATCTGC ACCCTGGCCG GGATGAACCC GAGCAAAGCC
TTGCAGGCGG AGCTGCGACA GGCCATCTGC AAGAGTTATG ACTACATGTA CCTGTTCCTC
GAGCGCTGCA TGCAGCTCGA ACTGTCGGAG CGGGTGATGG TCGGGCGTGA GCGTCGGGCA
CTGGTCGAGA GCTAG
 
Protein sequence
MIDTFNRTGP LMEAASYPAW AQQLIQDCSE SKRRVVEHEL YLRLRDNKLS AKTMRQYLIG 
GWPVVEQFAL YMAQNLTKTK FARHPGEDMA RRWLMRNIRV ELNHADYWLH WSRAHGVSLE
DLQAQQVPPE LHALSHWCWH TSSADSLIVA IAATNYAIEG ATGEWSALVC STGVYAAAFP
EEDRKRAMKW LKMHAQYDDA HPWEALEIIC TLAGMNPSKA LQAELRQAIC KSYDYMYLFL
ERCMQLELSE RVMVGRERRA LVES