| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4081 |
|---|
| Symbol | |
|---|
| ID | 3712326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4613350 |
|---|
| End bp | 4614048 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | 3-demethylubiquinone-9 3-methyltransferase |
|---|
| Protein accession | YP_349809 |
|---|
| Protein GI | 77460302 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.576596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.236104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG TCGACCACGC CGAAATCGCC AAATTCGAAG CCCTGGCCCA TCGCTGGTGG
GACCGCGAAA GCGAGTTCAA ACCGCTGCAC GACATCAACC CGCTGCGGGT CAACTGGATT
GACGAGCGCG TAAATCTGGC CGGCAAAAAG GTTCTCGACG TCGGTTGCGG CGGCGGCATT
CTCAGCGAAG CCATGGCCCA GCGCGGCGCG ACCGTGACCG GTATCGACAT GGGCGAAGCG
CCACTGGCGG TCGCGCAACT GCACCAACTG GAATCCGGGG TGAACGTCGA GTACCGCCAG
ATCACCGCCG AAGCCCTGGC CGAAGAAATG CCCGAGCAGT TCGACGTCGT CACCTGCCTG
GAAATGCTCG AACACGTGCC GGACCCGTCC TCGGTGATCC GTGCCTGCTT CCGCATGGTC
AAGCCCGGCG GCCAGGTGTT CTTCTCCACC ATCAACCGCA ATCCGAAGGC GTACCTGTTC
GCCATCGTCG GCGCCGAATA CATCATGAAG CTGCTGCCGC GCGGCACCCA CGACTTCAAG
AAATTCATCC GCCCGTCCGA GCTCGGCGCC TGGAGCCGTA TGGCCGGCCT GACCGTCAAG
GACATCATCG GCCTGACTTA CAACCCGCTG ACCAAGCACT ACAAGCTGGC GGCGGACGTT
GACGTCAACT ACATGATCCA GACCCTGCGC GAGGAGTAA
|
|---|
| Protein sequence | MSNVDHAEIA KFEALAHRWW DRESEFKPLH DINPLRVNWI DERVNLAGKK VLDVGCGGGI
LSEAMAQRGA TVTGIDMGEA PLAVAQLHQL ESGVNVEYRQ ITAEALAEEM PEQFDVVTCL
EMLEHVPDPS SVIRACFRMV KPGGQVFFST INRNPKAYLF AIVGAEYIMK LLPRGTHDFK
KFIRPSELGA WSRMAGLTVK DIIGLTYNPL TKHYKLAADV DVNYMIQTLR EE
|
|---|
| |