Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4078 |
Symbol | |
ID | 3712323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4607685 |
End bp | 4610348 |
Gene Length | 2664 bp |
Protein Length | 887 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | DNA gyrase subunit A |
Protein accession | YP_349806 |
Protein GI | 77460299 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0373422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.530642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGAAC TGGCCAAAGA AATCCTCCCG GTCAATATCG AAGACGAGCT GAAACAGTCC TATCTCGACT ACGCGATGAG CGTGATCGTC GGCCGTGCAC TGCCGGATGC GCGCGATGGC TTGAAGCCCG TGCACCGTCG CGTGCTGTTC GCGATGAGCG AGCTGGGCAA CGACTTTAAC AAGCCGTACA AGAAATCTGC CCGTGTCGTC GGTGACGTGA TCGGTAAGTA TCACCCGCAC GGTGATACCG CGGTGTACGA CACCATCGTC CGCATGGCGC AGCCTTTCTC CCTGCGTTAC CTGCTGGTCG ACGGCCAGGG CAACTTCGGT TCGGTGGACG GCGACAATGC CGCGGCCATG CGATACACCG AAGTGCGCAT GACCAAGCTG GCGCACGAGC TGCTGGCCGA CCTGCACAAG GAAACCGTGG ACTGGGTGCC GAACTACGAC GGCACCGAAC TGATCCCGGC GGTCATGCCG ACCCGCGTAC CGAACCTGCT GGTCAACGGT TCCAGCGGTA TCGCCGTGGG CATGGCGACC AACATTCCGC CGCACAACCT TGGTGAAGTC ATCGACGGTT GCCTGGCCCT CATCGACAAC CCCGAGCTGA CCGTCGATGA GCTGATGCAA TACATTCCCG GTCCGGACTT CCCGACTGCC GCGATCATCA ACGGTCGCGC TGGCATCATC GAAGCCTACC GCACCGGCCG TGGCCGCATT TACATGCGCG CCCGCTCGAT CATCGAAGAC ATCGACAAGG TCGGTGGCCG TCAGCAGATC GTCATCACCG AACTCCCTTA CCAGCTGAAC AAGGCGCGTC TGATCGAGAA GATCGCCGAG CTGGTAAAAG AGAAGAAACT CGAAGGCATC ACCGAACTGC GCGACGAGTC CGACAAGGAC GGTATGCGCG TCGTGATCGA ACTGCGTCGC GGCGAAGTGC CTGAGGTGAT CCTCAACAAC CTCTACGCCC AGACCCAGCT GCAATCGGTA TTCGGCATCA ACATCGTTGC GCTGATCGAC GGCCGTCCGC GGATCCTGAA CCTCAAGGAC CTGCTGGAAG CCTTCGTCCG TCACCGTCGC GAAGTGGTTA CCCGCCGTAC CGTGTTCGAA CTGCGCAAGG CGCGCGAGCG TGGTCACATC CTCGAAGGTC AGGCCGTTGC CCTGTCGAAC ATCGACCCGG TCATCGCTCT GATCAAGGCT TCGCCGACGC CGTCGGAAGC CAAGGAAGCG CTGGTCAGCA CGCCGTGGGA ATCCACTGCC GTGGTCGCGA TGGTGGAGCG TGCCGGTGCC GATTCTTGCC GTCCCGAAAA CCTCGATCCG CAATACGGTC TGCGCGACGG CAAGTACTTC CTGTCGCCAG AGCAGGCGCA AGCCATTCTG GAACTGCGTC TGCACCGCCT GACCGGTCTG GAACACGAAA AGCTGCTGGC CGAGTATCAA GAGATCCTCA ATCAGATCGG CGAGCTGATC CGCATCCTCA ACAGCGCCGT GCGCCTGATG GAAGTGATCC GCGAAGAGCT GGAAGTGATC CGCGCCGAAT ACGGCGACGT GCGCCGCACC GAGATCCTCG ATGCCCGTCT CGACCTGACC CTGGGCGACA TGATCCCGGA AGAAGAGCGC GTCGTGACCA TTTCCCACGG CGGTTATGCC AAGACCCAGC CGCTGGCGGC TTACCAGGCC CAGCGTCGTG GCGGTAAAGG CAAATCGGCT ACCGGCGTGA AGGATGAGGA CTACATCGCT CACCTGCTGG TCGCCAACAG CCATACCACG CTGCTGCTGT TCTCCAGCAA GGGCAAGGTG TACTGGCTGA AAACCTACGA AATTCCGGAG GCGTCCCGCG CCGCCCGTGG TCGTCCGCTG GTCAACCTGC TGCCGCTGGA TGACGGTGAA TACATCACCA CCATGCTGCC GGTCGAGGAA TACACCGAAG GTCACTACAT CTTCATGGCC ACCGCCAACG GCACCGTGAA GAAGACCCCG CTGGAATCCT TCAGCCGTCA GCGCAGCGTC GGTCTGATCG CGCTGGAACT GGACGAAGGC GACGTGCTGA TTTCTGCCGC CATCACCGAT GGCGAGCGTG AAGTGATGCT GTTCTCCGAC GGCGGCAAAG TGACCCGCTT CAAGGAATCC GACGTGCGTG CCATGGGCCG TACCGCCCGC GGTGTGCGCG GCATGCGTCT GCCGGAAGGG CAGAAGTTGA TTTCGATGCT GATCCCGGAA GAAGGCAGCC AGATCCTCAC CGCTTCCGAG CGTGGTTATG GCAAGCGTAC CGCGATCACC GAGTTCCCTG AGTACAAGCG TGGCGGCCAG GGCGTGATCG CCATGGTCAG CAACGAGCGT AACGGCCGTC TGGTCGGTGC GGTCCAGGTG CTCGACGGCG AGGAGATCAT GCTGATTTCC GACCAGGGCA CGCTGGTGCG TACCCGTGTC GACGAAGTCT CCAGTCTGGG TCGTAATACC CAGGGCGTGA CCCTGATCAA ACTGGCCAAG GATGAAACCC TGGTCGGTCT GGAGCGGGTT CAGGAGCCGT CGGAAGTCGA GGGTGAAGAG CTTGAAGGTG AAGAAGGTGT CGAACTGGAA GATGGCGTGA TCGGCGCCGA GCCGGACGAT GCGGTCGACA ACCTGCAGGC GGACGCCGCA GACGAAGAAG AGTCGCAAGA CTAA
|
Protein sequence | MGELAKEILP VNIEDELKQS YLDYAMSVIV GRALPDARDG LKPVHRRVLF AMSELGNDFN KPYKKSARVV GDVIGKYHPH GDTAVYDTIV RMAQPFSLRY LLVDGQGNFG SVDGDNAAAM RYTEVRMTKL AHELLADLHK ETVDWVPNYD GTELIPAVMP TRVPNLLVNG SSGIAVGMAT NIPPHNLGEV IDGCLALIDN PELTVDELMQ YIPGPDFPTA AIINGRAGII EAYRTGRGRI YMRARSIIED IDKVGGRQQI VITELPYQLN KARLIEKIAE LVKEKKLEGI TELRDESDKD GMRVVIELRR GEVPEVILNN LYAQTQLQSV FGINIVALID GRPRILNLKD LLEAFVRHRR EVVTRRTVFE LRKARERGHI LEGQAVALSN IDPVIALIKA SPTPSEAKEA LVSTPWESTA VVAMVERAGA DSCRPENLDP QYGLRDGKYF LSPEQAQAIL ELRLHRLTGL EHEKLLAEYQ EILNQIGELI RILNSAVRLM EVIREELEVI RAEYGDVRRT EILDARLDLT LGDMIPEEER VVTISHGGYA KTQPLAAYQA QRRGGKGKSA TGVKDEDYIA HLLVANSHTT LLLFSSKGKV YWLKTYEIPE ASRAARGRPL VNLLPLDDGE YITTMLPVEE YTEGHYIFMA TANGTVKKTP LESFSRQRSV GLIALELDEG DVLISAAITD GEREVMLFSD GGKVTRFKES DVRAMGRTAR GVRGMRLPEG QKLISMLIPE EGSQILTASE RGYGKRTAIT EFPEYKRGGQ GVIAMVSNER NGRLVGAVQV LDGEEIMLIS DQGTLVRTRV DEVSSLGRNT QGVTLIKLAK DETLVGLERV QEPSEVEGEE LEGEEGVELE DGVIGAEPDD AVDNLQADAA DEEESQD
|
| |