Gene Pfl01_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4047 
Symbol 
ID3713898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4571620 
End bp4572549 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349775 
Protein GI77460268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0440642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.318777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA CTGATCAGAA ACTTCACCTC GGATGTGGCT CGGTCACATT CCCCGGCTGG 
ATCAATATCG ATCTTGACTC CCCCACGGCC GATCGATTGC TCGATCTCAC TGAGCCATTG
CCGTTTGCGG ATTCCTCGGT CAGCCATATT TTCAACGAGC ATTTCATTGA ACATGTCACT
CGGGAACAGG CCGTAGCGTT CCTGAAAGAA TGCTTTCGGG TACTGACGCC TGGTGGCGCG
ATTCGGATCA CCACGCCCAA CCTGCGCTTC CTGACCCACT CCTATTTTTC GGACAGCAAA
AACGAGTGGG GCGATCTCTG GCAACCGAAT TCGCGATGCC AGATGATGAA CGAGGGAATG
CGTTCCTGGG GGCATCAGTT TGTCTACGAT GCGGAAGAGC TGACCCGGGC GATTGGTGAG
GCCGGATTCA AGTCCATTGT CTTTCAGTCG TATCGCAAGA GTGCGGATGA AGTTTTTTCC
GGCCTTGAGT CCCGTCCGTT TCACAACGAG CTGATTGTCG AGGCACGCAA GTCTTCGGCC
GTTGACGTGG ACGTCGATTT TTCCGCGGTC ACTGAAAATG AAGCGACCTG GCTTTCAAGC
GGCGCCGGCA GCGTACAGGC CAATGAACAC GCTTCGGTGC AAATGGCGCT GGAGTCTGCT
GCACGCGCGG AGTTCATCGA AGTTCAGTCC GCGCGCATTC GCGAGGTCGA AGCGGAGTTG
CTTGCCCAGC AAGCGCTCGT TCAGCAACAG GCCGGCAATG CCGATGCAAG GGTTGCGGAA
GTTGCGGGCA TCTCCCGATC GCTAGCGGCT CAAGTGCAGG CGAACGAAGC GCTCAAGTCG
CAACTCGATG AGGCCAGGGC TGAGCTGCAG GCCTATCAGG CGTCCTGGTG TGGACGCATC
AAATCTTTCT TTAACAGAAC TGCACAATAA
 
Protein sequence
MAQTDQKLHL GCGSVTFPGW INIDLDSPTA DRLLDLTEPL PFADSSVSHI FNEHFIEHVT 
REQAVAFLKE CFRVLTPGGA IRITTPNLRF LTHSYFSDSK NEWGDLWQPN SRCQMMNEGM
RSWGHQFVYD AEELTRAIGE AGFKSIVFQS YRKSADEVFS GLESRPFHNE LIVEARKSSA
VDVDVDFSAV TENEATWLSS GAGSVQANEH ASVQMALESA ARAEFIEVQS ARIREVEAEL
LAQQALVQQQ AGNADARVAE VAGISRSLAA QVQANEALKS QLDEARAELQ AYQASWCGRI
KSFFNRTAQ