Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4032 |
Symbol | |
ID | 3713941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4556969 |
End bp | 4559035 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | potassium-transporting ATPase subunit B |
Protein accession | YP_349760 |
Protein GI | 77460253 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.130016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATATGC ATGTTCCAGC TTCAAAACCA GCGGCAGCTG CCAAGTCGGC TGAAGCTCCG AAAACCGCGA TCAGCGCCCT GTGGCGCCCG GCGCTGGTGC AAGCGTTCGT CAAGCTCGAC CCGCGGCAGT TGCAGCGCTC GCCAGTGATG CTGGTGGTCG AACTGACAGC GATCCTGACC ACCGTGCTGT GCTTCATTCC CGACAGCAGC GTGCCGACCT TCGTTGCTGC GCAAATCGCC CTGTGGCTGT GGTTCACCGT GCTGTTCGCC AACTTCGCCG AAGCGCTGGC CGAAGGTCGC GGCAAGGCCC GCGCCGACAG CCTCAAGGCC GGCAGCGAAG GCCTCAGCGC CCGACGCAAA CTGGCCAACG GCAGCTTCCA GGTCGTACCG GCCAGCAGCC TGCGCAAGGG CGATGTGGTG CGCGTTGAAG CCGGCGAAAT GATCCCCGGT GACGGCGAGG TCATCGAAGG CATTGCGGCG GTCAACGAAG CAGCGATCAC TGGCGAATCG GCGCCGGTGA TCCGCGAGTC CGGCGGCGAC CGTTCCGCCG TTACCGGCAA CACCCGGCTG GTGTCCGACT GGCTGCTGGT GAAGATCACC GCCAATCCTG GTGAATCGAC CCTCGACCGC ATGATCGCGC TGGTCGAAGG CGCCAAACGC CAGAAGACCC CGAACGAAGT GGCACTGGAC ATCCTGCTGA TCGGCCTGAC CCTGATCTTC CTGCTGGTGG TCGTGACCCT GCAACCGTTC GCCCACTTCG CTAACGGCAG CCTGCCGCTG GTGTTCCTGG TGGCGTTATT GGTCACGCTG ATTCCGACCA CCATCGGCGG TCTGCTGTCG GCGATCGGTA TCGCCGGGAT GGATCGTCTG GTGCGCCTGA ACGTGATCGC CAAGTCCGGT CGCGCGGTGG AAGCGGCGGG TGACGTGCAC GTGTTGCTGC TGGACAAGAC CGGCACCATC ACCTTCGGTA ACCGTCGTTG CAGCGCGGTA TATGCCGCGC CGGGTGTGAA CGCCCGTGAG CTGGCCGAAG GCGCGCTGTT CGCCTCGCTG GCCGACGAAA CCGCTGAAGG CAAGTCCATC GTCGAGTACC TGCGCGGCTC CAATCCGCAG CCGGAACCTT CGCCGGAAAC CCTGACTGCC GTGCCGTTCA GTGCGGAAAC CCGTTTGTCC GGTGTCGACT ACCAGGGCCG TGTGTTCCGC AAGGGCGCGG TGGATTCGCT GCTGGCGTTC CTTGGTCAGC AACGCAAGGA TCTGGCCCCG GCGCTGTCCC GGGAAATCGA CAAGATCGCC CAGAGCGGCG GCACCCCGTT GCTGGTCTGC GCCGACGGCA AACTGCTTGG TGCGATCCAC CTCAAAGACG TGGTCAAGCC GGGCATCCGC GAGCGCTTCG CCGAGCTGCG CAAACTGGGG ATTCGCACGG TGATGGTGAC TGGCGACAAC CCGCTGACCG CTGCCGCGAT TGCCGCTGAA GCGGGCGTCG ACGATGTATT GGCCGAAGCC ACACCGGAGA AAAAACTGGC GCGTATCCGT CACGAGCAGA ACGACGGTCG TCTGGTCGCG ATGTGCGGCG ACGGCGCCAA CGATGCTCCG GCGCTGGCCC AGGCTGACGT CGGCATGGCG ATGAACGACG GCACACAAGC CGCGCGTGAG GCGGCCAACA TGGTCGACCT CGACAGCGAC CCGACCAAGT TGCTGGACGT GGTGCAGATC GGCAAGGAAT TGCTGGTGAC TCGCGGTGCG CTGACGACCT TTTCCATCGC CAACGACGTG GCCAAGTACT TTGCGATCCT GCCGGCACTG TTTGCTGCGA TCTACCCGCA ACTGGGTGTG CTGAACATCA TGCAGTTGAG CAGCCCGCAG AGCGCGATCC TGTCAGCCAT CGTGTTCAAC GCTTTGATCA TCGTGGTGCT GATTCCGTTG GCCCTGCGTG GTGTGCGGGT GCAGGCGGCG AGCGCGGCGG CGCTGCTGCG TCGCAATCTG CTGATCTATG GCCTGGGCGG GATTCTGGTG CCGTTCGTGG GGATCAAGGC GATCGACATG CTGTTGACGG CGTTGCATCT GGTTTGA
|
Protein sequence | MNMHVPASKP AAAAKSAEAP KTAISALWRP ALVQAFVKLD PRQLQRSPVM LVVELTAILT TVLCFIPDSS VPTFVAAQIA LWLWFTVLFA NFAEALAEGR GKARADSLKA GSEGLSARRK LANGSFQVVP ASSLRKGDVV RVEAGEMIPG DGEVIEGIAA VNEAAITGES APVIRESGGD RSAVTGNTRL VSDWLLVKIT ANPGESTLDR MIALVEGAKR QKTPNEVALD ILLIGLTLIF LLVVVTLQPF AHFANGSLPL VFLVALLVTL IPTTIGGLLS AIGIAGMDRL VRLNVIAKSG RAVEAAGDVH VLLLDKTGTI TFGNRRCSAV YAAPGVNARE LAEGALFASL ADETAEGKSI VEYLRGSNPQ PEPSPETLTA VPFSAETRLS GVDYQGRVFR KGAVDSLLAF LGQQRKDLAP ALSREIDKIA QSGGTPLLVC ADGKLLGAIH LKDVVKPGIR ERFAELRKLG IRTVMVTGDN PLTAAAIAAE AGVDDVLAEA TPEKKLARIR HEQNDGRLVA MCGDGANDAP ALAQADVGMA MNDGTQAARE AANMVDLDSD PTKLLDVVQI GKELLVTRGA LTTFSIANDV AKYFAILPAL FAAIYPQLGV LNIMQLSSPQ SAILSAIVFN ALIIVVLIPL ALRGVRVQAA SAAALLRRNL LIYGLGGILV PFVGIKAIDM LLTALHLV
|
| |