Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4030 |
Symbol | |
ID | 3713939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4553680 |
End bp | 4556331 |
Gene Length | 2652 bp |
Protein Length | 883 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | osmosensitive K+ channel Signal transduction histidine kinase |
Protein accession | YP_349758 |
Protein GI | 77460251 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.706395 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACT CCGGCCGCGC CGACGCGCTG TTAGCAGAAC TGCCCCGCGA CGGACGCGGC CGGCTCAAGG TTTTTCTCGG CGCAGCGCCA GGCGTGGGCA AGACCTACGC GATGCTGCAG GCCGCCCACA GCCAGCTGCG CCAAGGCGTG AAAGTCATCG CCGGGGTGGT CGAAACCCAC GGCCGCGCCG AAACCGAAGC GCTGCTCGGC GGCCTGCCGC AACTGCCGCT GGTGCGCTCG GAATACCGTG GCGTGACGCT CGAAGAAATG GACCTCGACG GCCTGCTCGC CGCCAGGCCG AAACTGGTGC TGGTCGACGA ACTCGCCCAC AGCAACGCCC CCGGCAGCCG TCACGCGAAA CGCTGGCAGG ACATTCAGGA GCTGCTCGCC GCCGGCATTG ACGTCTACAC CACGGTCAAC GTCCAGCACC TGGAAAGTCT CAACGATCAG GTGCGCGGCA TTACCGGCGT GCAGGTGCGC GAAACCCTGC CGGACTGGGT ACTGCAAGAA GCCTACGAAC TGCTGCTGAT CGACCTGCCG CCCCGCGAAC TGCTCGAGCG CCTGCGCGAA GGCAAGGTCT ACGTGCCGGA ACAGGCGCGG GCGGCGATCG ATGCATTTTT CACCCAGACC AACCTCACCG CGCTGCGCGA ACTGGCGATG CAGACCGCTG CCGCGCAGGT CGATAACGAT CTCGCTCAGG GCTATCGCCA GCTCGGTCAG GCGGCGCCAG CGGTGCGCGG GCGCTTGCTG GTCGGGGTCG ACGGCGATGC CCAGGCCGAA CGGCTGGTGC GCCATGCCAG CCGGGTCGCC CAGCGTCGGC ATTTGCCGTG GAGTCTGGTG CACGTCGACA ACGGCAGCGT GCGCGACGAG CAATCGCGCC TGCGCCTGCA AAGCGCCCAG CAACTGGCCG AACGCCTCGG CGGCGAAGTG GTGCTGCTGC GGGCCGGTGA GGTGGCGAAA ACCCTCATCC AGCATGCCGC TGAACGGCGG GCAAGTCTGG TGCTGGTCGG CCAGTCGCGA CCGCGCCTGC GCAGGCGTCT GTTCGGTGGT GGGCTGGCGG CGCGTCTGCT GCGTCAGGCC CACGGTCTGG AAATCAACGT GCTGGACAGC GATCAGGAAC AGCATCAACC GCGCCCGCGT TCAGCACCGA CGCTGGTGTG GTTCGACTAT GCGCTGGCGC TGGTCGCCAC GGTATTGGCC AGTGCGCTGG CGTGGGCGGT GTCCAGCGTG CTGCCGCTGC CGAACATCTC GCTGGTGTTT CTGGCGGCGG TGTTGCTGGT GGCGGTGCGC AGCAGTCTCG GCCCGGCGCT GGCCTGTGCG GCGCTGTCGT TTCTGACCTA TGACTTTCTG TTCATCCCGC CGAATTTCTC CTTCAGCATC CAGCGCGAAG AAGACGTGCT GACCTTGCTG TTCTTCTTGT TGATGGCGGC GCTCACCGGC AACCTCGCGG CCCGCCAGCG CCGGCAATTG CAGGCGTTGC GCGACACCCA GGAAGAGACC ACCGAATTGC TCGACCTGTC GCGCAAACTC ACTGCCGCCA CTGACCGTCA GGCCGTGGTC AGCGCCGCCG CGCAGCACCT CAATGGCTGG AGCGATCTGC AACTGTGCCT GCTCAATCGC GACGGGCAGG GCGGCTGGAA AGTCGAAACC GGCGGCCCGC TGCAATTCAC TGAATCCGAG CGCGCCGCCG CCGACTGGGC CTGGCAACAC GATCAACCGG CAGGCATGGG CACCGGCACG TTGCCGTTCG GGCGCTGGTG GTGGTGGCCG CTGTCGGTGG AAGACGGGCC GCTGGCGCTG CTCGGTGTGT GTGCCAAAGA GGGCCAGACC TTGAGCGGGC AACGCCGTCG TTTGCTGACC GCGTTGAGTC AGCCGCTGGC TCAAGCATTG GCCCGGGCGC AACTGGCCGA TGATCTGGAA GCCGCGCGCC TGCACGGCGA AACCGAGCAA CTGCGCAGCG CCTTGCTGGC CTCGGTGTCC CACGATCTGC GCACGCCGCT GACCTCGATG CGCGGCAGCA TCGACAGCCT GCTGGCGCTC GGCGAAGCGA TCCCGCTGGA GGATCGCCGC GAATTGCTCG AAGGCACTCG CGATGAGGCC GAGCGTCTCG ATCGCTACAT CCAGAACCTG CTGGACATGA CCCGTCTCGG CCACGGCGCC CTGAAGCTGG CGCGGGACTG GGTGTCGCCC GCAGACATCG TCGGCAGTGC GCTCAATCGC CTGCGGGCGG TGTTGTCGTC GCTGCAAGTG AGCACCGATG TACCGGCCGA GTTGCCGCTG CTGTACGTGC ATGCCGCGCT GATCGAACAG GCGCTGGTGA ACGTGCTGGA AAACGCCGCC CGCTTCTCGC CATCCCACGG CCGTCTGCAA TTGCGCGCCG GGGCGGATGA CAGCGAAGTG TTTTTCTCGG TCAGCGATGA AGGGCCGGGG ATTCCGGTCG ATGAGCGAGC GAAGATTTTC GACATGTTCT ACACCGCCGC CCGAGGTGAT CGGGGCGGGC AGGGCACCGG CCTGGGGCTG GCGATCTGTC AGGGCATGGT CGGCGCCCAT GGCGGGCGGA TCAGTGTCGG CGACGGCATC GACGGGCGCG GCACCTGCAT CACCTTGCAC CTGCCGTTGC AGACGCAACC GGGGATGGAC GATGAAGCCT GA
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Protein sequence | MSDSGRADAL LAELPRDGRG RLKVFLGAAP GVGKTYAMLQ AAHSQLRQGV KVIAGVVETH GRAETEALLG GLPQLPLVRS EYRGVTLEEM DLDGLLAARP KLVLVDELAH SNAPGSRHAK RWQDIQELLA AGIDVYTTVN VQHLESLNDQ VRGITGVQVR ETLPDWVLQE AYELLLIDLP PRELLERLRE GKVYVPEQAR AAIDAFFTQT NLTALRELAM QTAAAQVDND LAQGYRQLGQ AAPAVRGRLL VGVDGDAQAE RLVRHASRVA QRRHLPWSLV HVDNGSVRDE QSRLRLQSAQ QLAERLGGEV VLLRAGEVAK TLIQHAAERR ASLVLVGQSR PRLRRRLFGG GLAARLLRQA HGLEINVLDS DQEQHQPRPR SAPTLVWFDY ALALVATVLA SALAWAVSSV LPLPNISLVF LAAVLLVAVR SSLGPALACA ALSFLTYDFL FIPPNFSFSI QREEDVLTLL FFLLMAALTG NLAARQRRQL QALRDTQEET TELLDLSRKL TAATDRQAVV SAAAQHLNGW SDLQLCLLNR DGQGGWKVET GGPLQFTESE RAAADWAWQH DQPAGMGTGT LPFGRWWWWP LSVEDGPLAL LGVCAKEGQT LSGQRRRLLT ALSQPLAQAL ARAQLADDLE AARLHGETEQ LRSALLASVS HDLRTPLTSM RGSIDSLLAL GEAIPLEDRR ELLEGTRDEA ERLDRYIQNL LDMTRLGHGA LKLARDWVSP ADIVGSALNR LRAVLSSLQV STDVPAELPL LYVHAALIEQ ALVNVLENAA RFSPSHGRLQ LRAGADDSEV FFSVSDEGPG IPVDERAKIF DMFYTAARGD RGGQGTGLGL AICQGMVGAH GGRISVGDGI DGRGTCITLH LPLQTQPGMD DEA
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