Gene Pfl01_4021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4021 
Symbol 
ID3713930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4545899 
End bp4546705 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content63% 
IMG OID 
ProductSec-independent protein translocase TatD 
Protein accessionYP_349749 
Protein GI77460242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCA TCGATATCGG CGTCAACCTG ACCAACCCCA GTTTCGCCGA CAAACACCAG 
GCCGTGCTCG ACCGCGCCTA CGCTGCCGGG GTCTGCCAAC TGGTGCTGAC CGGCACCAGC
GTCGAGGGCA GCGAACAGGC GCTGGAGCTG TGCCAGCAAC TGGATCCGGA CGGCCAGCGA
CTGTTCGCCA CCGCCGGCAT TCACCCGCAT TCCGCCAGCG ACTGGAACGC CGACAGCGCA
AGGCGTCTGC GCAGTCTGTT GCAGGAATCG AACGTGGTGG CGGTGGGCGA ATGCGGACTG
GATTTCAACC GCGATTTCTC GCCGCGCCCG CAGCAGGAAA AAGTCCTCGA AGAGCATCTG
GCGCTGGCTG CCGAACTGCA ACTGCCGGTG TTCCTGCATG AACGTGATGC AAGCCAGCGC
CTGCTGGAAA TCCTCCGTGA CTTCCGCGAT CAGTTGCCGG CCGCCGTGGT GCATTGCTTT
ACCGGCGAAC AGAAAGCGCT GTTCAGTTAC CTCGACCTGG ACCTGCACAT CGGCATCACC
GGCTGGATCT GCGACGAGCG TCGCGGCACC CATTTGCATC CGCTGGTGAA GGAGATCAAG
CGCGGTCGAC TGATGCTCGA AAGCGATGCG CCATATCTGC TGCCGCGCAC ACTGCGGCCA
AAGCCGAAAA ACGGGCGCAA CGAGCCAGCG TACCTGACCG AAGTGTTGCG TGAAGTCGCG
TTGCATCGAG GCGAAACCGA AGCAGACCTG GCCGCCCACA CAACCGCGTG CGCACGGGCG
TTCTACGGTT TACCTATCCT GCCCTGA
 
Protein sequence
MQLIDIGVNL TNPSFADKHQ AVLDRAYAAG VCQLVLTGTS VEGSEQALEL CQQLDPDGQR 
LFATAGIHPH SASDWNADSA RRLRSLLQES NVVAVGECGL DFNRDFSPRP QQEKVLEEHL
ALAAELQLPV FLHERDASQR LLEILRDFRD QLPAAVVHCF TGEQKALFSY LDLDLHIGIT
GWICDERRGT HLHPLVKEIK RGRLMLESDA PYLLPRTLRP KPKNGRNEPA YLTEVLREVA
LHRGETEADL AAHTTACARA FYGLPILP