| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4020 |
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| Symbol | |
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| ID | 3713929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 4544241 |
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| End bp | 4545662 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_349748 |
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| Protein GI | 77460241 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.553883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGTC CCTCGGTTTT GCTCCTGCTG TGTGGTTCGC TGCTGCTGCC GATGACGGCG
GTCGCGCGGC TGCCCGGACC GCTGCAAGCC GTGCCGGCCG CCAAGGTCCG CGACCTGACC
GAGATCCGCA GCAGCCGCGT GTTGCGGGTG CTGGTCAACC AGAGCCGCAA CAGCTCCGGC
GAAGTCCAGG GCCAGGCCAT CGGCATCGAA TACCACCGTC TGCGCGCCTT CGAGCAATAC
CTCAATGGCC ACGCTCGCGA CGGCCAGGAA ATCACCCTCA AGATCATCCC CAAAGCCAAG
GATCAATTGC TCGGTGCGTT GCAGCGCGGC GAAGGCGATC TTGTGGCGCC GGGCGAACTG
CTCGAGCTGC AACCGGGCCA CGCGGTTGCC AGCAGCGAGC CGATCGCCAG CAACGTGCCG
CTGGTGCTGG TTGGCATCAA GGGTGAAAAG CGCTACACCA AGGTCGAGCA ACTGGCCGGC
AAAACCCTGG CGCTGCCCAC CGGCAGTGCG GCGGGGGAGG CGGTCAGTCA GCTCAACCAG
AAGCTGGCGC TGCACAAACT GGCGCCGATC AGGATCGAAT GGGTCGATCC GACCCTTGCG
GTCGAAGACG TGCTGGAGAT GGTTCAGGGC GGGATTTTCC ACCTGACCAT TGTCGAGCAA
CCGATTGCCG AGCGGTGGGG CAAGATCCTG CCCAAGCTGC GTTTCGACCG TCAGGTGATG
ATCAGCGAAC CGGGCGAGGA ATATTGGTTC GTGCGCCGTG ATGCGTCGAT GTTGCGGGCC
AGCATCGACC GCTTCCTGAC CGGCTACAAA AAACCATCGA ACGAAGATGC GGCGTTCCTG
CGGATCTACC GCCGCCTCTA TCAAGTGCAC TATCCGTTGG CCAAGGCTGA CCGTCAGCGT
CTGGAAAAAC TGCGCCCGAC CCTGCAGAAA CACGCCGAAG CGCAAAACAT GGACTGGCTC
AACCTGGCGG CGCTGGCCTT CAAGGAGTCG GCGCTGCAGC CCAACGCGCG CAGCGGCAGC
GGGCCGACCG GGCTGATGCA GATCACCCCG TCCGCGGCAC AGCGGGTTGG CGTCAACAAC
ATCCAGAATC TCGATGCGAA TGTGCAGGCC GGGGCCAAGT ACCTGGCGAT GATCCGCCGC
AAGTTCTTCA ACAGTCCGAA ACTCAATGAG CGCGAGCGCA TGGCGTTCAC TCTGGCGGCT
TACAACATCG GCCCGGAACG GGTGCAAGGC ATGCGTGCCG AGGCGCGGCG TCGCGGCCTG
AATCCCAACC AATGGTTCTT TCAGGTCGAG CGCATCGCCA TGGAGCAGGT GGGAATGGGC
GCCGTCAGCT ATGTTAATAG CGTGAACAAG TATTACTTGG CGTTCGACCG GGAGCGGGAG
TCGTTGGAGC CCGGGGGGCA GAAAGTTGTC TCACGCAAAT GA
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| Protein sequence | MVRPSVLLLL CGSLLLPMTA VARLPGPLQA VPAAKVRDLT EIRSSRVLRV LVNQSRNSSG
EVQGQAIGIE YHRLRAFEQY LNGHARDGQE ITLKIIPKAK DQLLGALQRG EGDLVAPGEL
LELQPGHAVA SSEPIASNVP LVLVGIKGEK RYTKVEQLAG KTLALPTGSA AGEAVSQLNQ
KLALHKLAPI RIEWVDPTLA VEDVLEMVQG GIFHLTIVEQ PIAERWGKIL PKLRFDRQVM
ISEPGEEYWF VRRDASMLRA SIDRFLTGYK KPSNEDAAFL RIYRRLYQVH YPLAKADRQR
LEKLRPTLQK HAEAQNMDWL NLAALAFKES ALQPNARSGS GPTGLMQITP SAAQRVGVNN
IQNLDANVQA GAKYLAMIRR KFFNSPKLNE RERMAFTLAA YNIGPERVQG MRAEARRRGL
NPNQWFFQVE RIAMEQVGMG AVSYVNSVNK YYLAFDRERE SLEPGGQKVV SRK
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