| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4014 |
|---|
| Symbol | |
|---|
| ID | 3713923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4538801 |
|---|
| End bp | 4539406 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | lipolytic protein |
|---|
| Protein accession | YP_349742 |
|---|
| Protein GI | 77460235 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00000555437 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.540801 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTGT GGTTTTTGAG TGCTGGCCTG GCCTTGATGT GCATGGCCCA GAACGCAGCG
GCGGGTACAG TCCTGATCGT TGGCGATAGT ATCAGCGCCG GTTTCGGACT GGATACCCGG
CTGGGGTGGG TGTCGTTGCT CGAACAGCGG CTCAAGAGCG AAGGTTTTGA CGACAAAGTG
GTCAATGCGT CCATCAGCGG TGACACCAGT GCCGGAGGCC AGGCGCGGCT GCCGGCGCTG
CTTGCAGAGC ACAAGCCGGA ACTGGTGATC CTCGAATTGG GCGGCAACGA TGGCCTGCGC
GGAATGCCGC CGACGCAATT GCAACAAAAT CTTGCTTCGA TGATCGACAG CTCCCGTCAA
AGCGGTGCCA AGGTGCTGTT GCTCGGCATG CAGTTGCCGC CCAATTACGG CAAGCGCTAC
ACTGATGCCT TCGCCGAGGT CTACGGCAAA CTCGCCGAGG AGAAAAAAAT CCCGCTGGTG
CCGTTTTTTC TCGACGGTGT GGGCGGGCAT CCGGACTTGA TGCAGGCCGA CGGTCTGCAC
CCGGCGGCCG GGGCTCAGGG CAAGTTGCTG GAAAATGTCT GGCCGACGCT AAAACCGCTG
TTATGA
|
|---|
| Protein sequence | MRVWFLSAGL ALMCMAQNAA AGTVLIVGDS ISAGFGLDTR LGWVSLLEQR LKSEGFDDKV
VNASISGDTS AGGQARLPAL LAEHKPELVI LELGGNDGLR GMPPTQLQQN LASMIDSSRQ
SGAKVLLLGM QLPPNYGKRY TDAFAEVYGK LAEEKKIPLV PFFLDGVGGH PDLMQADGLH
PAAGAQGKLL ENVWPTLKPL L
|
|---|
| |