Gene Pfl01_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4008 
Symbol 
ID3713976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4534313 
End bp4534756 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349736 
Protein GI77460229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000124966 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.953657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGGT TTATTCCTCA TCCGGATGAT GTGCCCGTTG AATTGACCTT GCTCACACCG 
GAGTGTATTT CGCGTCAACG GCTGCACACT ATCAGCCTCG GCGGCATCGC TTGCAATTAC
CACCGTGCCT GGCGCCATGG CACCGCGCTG CAGGTGCGCA TGCCGACTCT CAATGCCGAC
ATCTGTTATC CGGGCTACGT GGCCTGGTGC CTGCGTCGCA AGAAAGGCTA TCTGGTGGGC
ATCGCCTTCA CCGACGAACA GACGCTGTTC AGCGCGCGAA TGGGTGAGCA GGTGTGTCAG
ATCGAACGCT ATTGCCGACT CAACGACGCC CACGACGACC TCCAGGATAT TCAGGCCCTG
GCCCTGCAAT GGGTCGAACA ACACGCCGAC GAGTTCTCCC ACGACACCGT TCGCAAGGCG
TTTGCGCAGC CTGTGCTGGA CTGA
 
Protein sequence
MGRFIPHPDD VPVELTLLTP ECISRQRLHT ISLGGIACNY HRAWRHGTAL QVRMPTLNAD 
ICYPGYVAWC LRRKKGYLVG IAFTDEQTLF SARMGEQVCQ IERYCRLNDA HDDLQDIQAL
ALQWVEQHAD EFSHDTVRKA FAQPVLD