Gene Pfl01_3990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3990 
Symbol 
ID3714016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4519592 
End bp4520938 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content63% 
IMG OID 
Product3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 
Protein accessionYP_349718 
Protein GI77460211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.490123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC CCTGGAGCCC TGACAGCTGG CGCGCCCTGC CGATCCAGCA ACAACCCCAA 
TACCCCGACG CCGCGCATCT GCGCCAGGTC GAGCAGACGC TGGCCAGCTA TCCGCCGCTG
GTATTTGCCG GCGAAGCGCG CGAGCTGCGT CGTCAGTTTG CCGAAGTCAC CCAGGGCCGG
GCGTTCCTGC TGCAGGGCGG CGATTGCGCG GAAAGCTTCG CCGAGTTCTC CGCCGCGAAG
ATTCGCGACA CTTTTAAAGT ATTGCTGCAA ATGGCGATCG TCATGACCTT CGCCGCCGGC
TGCCCGGTGG TGAAAGTCGG GCGCATGGCC GGTCAGTTCG CCAAGCCCCG CTCGGCCAAC
GACGAGACCA TCGACGGCGT GACCCTGCCG GCCTACCGGG GCGACATCGT CAACGGCATC
GGTTTCGACT CGGCCAGCCG CGTACCGGAT CCGGAGCGTC TGCTGCAGTC CTATCACCAG
TCCACCGCCA CCCTCAACCT GTTGCGCGCT TTCGCCCAGG GCGGTTTTGC CGACCTGCAT
CAGGTGCACA AGTGGAACCT CGATTTCATC GCCAACTCGG CGCTGGCGGA GAAGTACAGC
CACCTCGCCG ACCGCATCGA TGAAACCCTG GCCTTTATGC GCGCCTGCGG CATGGACAGC
TCGCCGCAAC TGCGCGAGAC CAGTTTCTTC ACCGCCCACG AAGCGCTGCT GCTGAACTAC
GAAGAAGCCT TCGTGCGCCG CGACAGCCTG ACCAACGATT ACTACGATTG CTCGGCGCAC
ATGCTGTGGA TCGGCGACCG CACCCGTCAG CTCGACGGCG CCCACGTCGA ATTCCTGCGC
GGGGTGAACA ATCCGATCGG TGTCAAAGTC GGCCCGAGCA TGAACCCCGA CGATCTGATC
CGCCTGATCG ACGTGCTCAA CCCGGACAAC GATCCGGGCC GCCTCAACCT GATCGCGCGA
ATGGGCGCGA ACAAGGTCGG CGTTCACCTG CCGGCGCTGA TCCGTGCGGT GCAACGTGAA
GGCAAGCAGG TGCTGTGGAG TTCCGACCCG ATGCATGGCA ACACCATCAA GGCCAGCAGC
GGCTACAAGA CTCGCGACTT CGCGCAGATC CTTGGCGAGG TGAAGCAGTT CTTCCAGGTT
CACGAGGCTG AAGGCAGCTA CGCTGGCGGC ATCCACATCG AGATGACCGG GCAGAACGTC
ACCGAGTGCA TCGGTGGCGC GCGGCCGATC ACTGAAGATG GCTTGTCGGA TCGCTATCAC
ACTCACTGCG ACCCACGGAT GAATGCCGAT CAGTCGCTGG AACTGGCGTT CTTGATTGCC
GAGACGTTGA AACAGGTCAA ACGCTGA
 
Protein sequence
MSQPWSPDSW RALPIQQQPQ YPDAAHLRQV EQTLASYPPL VFAGEARELR RQFAEVTQGR 
AFLLQGGDCA ESFAEFSAAK IRDTFKVLLQ MAIVMTFAAG CPVVKVGRMA GQFAKPRSAN
DETIDGVTLP AYRGDIVNGI GFDSASRVPD PERLLQSYHQ STATLNLLRA FAQGGFADLH
QVHKWNLDFI ANSALAEKYS HLADRIDETL AFMRACGMDS SPQLRETSFF TAHEALLLNY
EEAFVRRDSL TNDYYDCSAH MLWIGDRTRQ LDGAHVEFLR GVNNPIGVKV GPSMNPDDLI
RLIDVLNPDN DPGRLNLIAR MGANKVGVHL PALIRAVQRE GKQVLWSSDP MHGNTIKASS
GYKTRDFAQI LGEVKQFFQV HEAEGSYAGG IHIEMTGQNV TECIGGARPI TEDGLSDRYH
THCDPRMNAD QSLELAFLIA ETLKQVKR