Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3990 |
Symbol | |
ID | 3714016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4519592 |
End bp | 4520938 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase |
Protein accession | YP_349718 |
Protein GI | 77460211 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.490123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC CCTGGAGCCC TGACAGCTGG CGCGCCCTGC CGATCCAGCA ACAACCCCAA TACCCCGACG CCGCGCATCT GCGCCAGGTC GAGCAGACGC TGGCCAGCTA TCCGCCGCTG GTATTTGCCG GCGAAGCGCG CGAGCTGCGT CGTCAGTTTG CCGAAGTCAC CCAGGGCCGG GCGTTCCTGC TGCAGGGCGG CGATTGCGCG GAAAGCTTCG CCGAGTTCTC CGCCGCGAAG ATTCGCGACA CTTTTAAAGT ATTGCTGCAA ATGGCGATCG TCATGACCTT CGCCGCCGGC TGCCCGGTGG TGAAAGTCGG GCGCATGGCC GGTCAGTTCG CCAAGCCCCG CTCGGCCAAC GACGAGACCA TCGACGGCGT GACCCTGCCG GCCTACCGGG GCGACATCGT CAACGGCATC GGTTTCGACT CGGCCAGCCG CGTACCGGAT CCGGAGCGTC TGCTGCAGTC CTATCACCAG TCCACCGCCA CCCTCAACCT GTTGCGCGCT TTCGCCCAGG GCGGTTTTGC CGACCTGCAT CAGGTGCACA AGTGGAACCT CGATTTCATC GCCAACTCGG CGCTGGCGGA GAAGTACAGC CACCTCGCCG ACCGCATCGA TGAAACCCTG GCCTTTATGC GCGCCTGCGG CATGGACAGC TCGCCGCAAC TGCGCGAGAC CAGTTTCTTC ACCGCCCACG AAGCGCTGCT GCTGAACTAC GAAGAAGCCT TCGTGCGCCG CGACAGCCTG ACCAACGATT ACTACGATTG CTCGGCGCAC ATGCTGTGGA TCGGCGACCG CACCCGTCAG CTCGACGGCG CCCACGTCGA ATTCCTGCGC GGGGTGAACA ATCCGATCGG TGTCAAAGTC GGCCCGAGCA TGAACCCCGA CGATCTGATC CGCCTGATCG ACGTGCTCAA CCCGGACAAC GATCCGGGCC GCCTCAACCT GATCGCGCGA ATGGGCGCGA ACAAGGTCGG CGTTCACCTG CCGGCGCTGA TCCGTGCGGT GCAACGTGAA GGCAAGCAGG TGCTGTGGAG TTCCGACCCG ATGCATGGCA ACACCATCAA GGCCAGCAGC GGCTACAAGA CTCGCGACTT CGCGCAGATC CTTGGCGAGG TGAAGCAGTT CTTCCAGGTT CACGAGGCTG AAGGCAGCTA CGCTGGCGGC ATCCACATCG AGATGACCGG GCAGAACGTC ACCGAGTGCA TCGGTGGCGC GCGGCCGATC ACTGAAGATG GCTTGTCGGA TCGCTATCAC ACTCACTGCG ACCCACGGAT GAATGCCGAT CAGTCGCTGG AACTGGCGTT CTTGATTGCC GAGACGTTGA AACAGGTCAA ACGCTGA
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Protein sequence | MSQPWSPDSW RALPIQQQPQ YPDAAHLRQV EQTLASYPPL VFAGEARELR RQFAEVTQGR AFLLQGGDCA ESFAEFSAAK IRDTFKVLLQ MAIVMTFAAG CPVVKVGRMA GQFAKPRSAN DETIDGVTLP AYRGDIVNGI GFDSASRVPD PERLLQSYHQ STATLNLLRA FAQGGFADLH QVHKWNLDFI ANSALAEKYS HLADRIDETL AFMRACGMDS SPQLRETSFF TAHEALLLNY EEAFVRRDSL TNDYYDCSAH MLWIGDRTRQ LDGAHVEFLR GVNNPIGVKV GPSMNPDDLI RLIDVLNPDN DPGRLNLIAR MGANKVGVHL PALIRAVQRE GKQVLWSSDP MHGNTIKASS GYKTRDFAQI LGEVKQFFQV HEAEGSYAGG IHIEMTGQNV TECIGGARPI TEDGLSDRYH THCDPRMNAD QSLELAFLIA ETLKQVKR
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