Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3989 |
Symbol | |
ID | 3714015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4518686 |
End bp | 4519441 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_349717 |
Protein GI | 77460210 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGAGG AGCGCGTCGA GCTGTTGCTC GCCGAGGTAC AGGATGAGTT CGGCGTGATT CGCGTGCTGG AAGTGGCCGA CTACCGCTTT CTGGAGTTCG GCGATGCGAT CGAGCAAAGC TGTGTGTTCA CCGCCGACCC GAGCTGGCTG GAGTATGACT ACACCCGGGC GATGCTGATC GGCGCGTTGT GCCACGAGCA ACCGGAGAGC GCGCTGTTTC TCGGGCTGGG CGCGGGGACG CTGACCCAGG CCTGCCTCAA GTTCCTGCCG CTGGAAGATG TCGAAGCCAT CGAGCTGCGC CCTGACGTAC CGCGTCTGGC CATCGAATAC CTCGGGCTGG ATGACGATCC GCGGCTGTAC ATTCGCGTCG GTGATGCTCT CGAACTGCTG CCGACGGCAG AACCGGCGGA TCTGATCTTC GTCGACCTGT ACACCGATGT CGGCCCCGGC GCCGGGCACC TTGCGTGGAA TTTCCTCGGT GACTGTCAGA AACGTCTGAA TCCCGGTGGC TGGCTGGTGA TCAACCAATG GGCCACCGAT GATGGCAAAC CCTTGGGCGC GGCGCTGCTG CGCGGGCTCT ATCACCGGCA TTACTGGGAG CTGCCGGTGA AGGAGGGCAA CGTGATTCTG ATCGTGCCGG CGGATCTCGA TCAGGTGCTG GACATGCAGG CGCTGACCGC CCGGGCTGAA GCGCTGGCGC CTAAGCTGGG CTACTCGTTG CAGACGTTGA TCAACTGCAT ACGTCCGGCG ACCTGA
|
Protein sequence | MTEERVELLL AEVQDEFGVI RVLEVADYRF LEFGDAIEQS CVFTADPSWL EYDYTRAMLI GALCHEQPES ALFLGLGAGT LTQACLKFLP LEDVEAIELR PDVPRLAIEY LGLDDDPRLY IRVGDALELL PTAEPADLIF VDLYTDVGPG AGHLAWNFLG DCQKRLNPGG WLVINQWATD DGKPLGAALL RGLYHRHYWE LPVKEGNVIL IVPADLDQVL DMQALTARAE ALAPKLGYSL QTLINCIRPA T
|
| |