Gene Pfl01_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3980 
Symbol 
ID3714006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4510064 
End bp4510525 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID 
ProductMarR family transcriptional regulator 
Protein accessionYP_349708 
Protein GI77460201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.436486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.638371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACC TGTCCGCCGA TTCGCTGAAA CTCGACAGTC AGCTGTGCTT CAAGTTGTAC 
GCCGCATCGC GGGCGGTGAT CCGTGCCTAC AAACCGATGC TCGATCAGCT CGGCCTGACC
TATCCGCAAT ATCTGGCAAT GCTGGTGTTG TGGGAATGGC AGCAAACTGC GCCGGAGCAA
CCGACAGTCA AGGCGCTGGG TGAGCGTCTG GCACTGGACT CCGGCACGCT GACGCCGCTG
CTCAAGCGAT TGGAGCAACT GCAACTGGTT CAGCGTCAGC GCTCGGCCCG GGACGAGCGT
GAAGTTCATC TGAGCCTTAC GCGGCAAGGG CAGGCGCTGC GTGAACAGGT CGGGCCGTTG
AAGGCGCGGC TGTTGTGCGA CAGCGGGGTT GATCTGGACC GGCTCAATGA CTTGCGTAGC
GGTCTTGATC ACTTGCTGGG GCAGATCAAA GCACTGTCGT AG
 
Protein sequence
MNNLSADSLK LDSQLCFKLY AASRAVIRAY KPMLDQLGLT YPQYLAMLVL WEWQQTAPEQ 
PTVKALGERL ALDSGTLTPL LKRLEQLQLV QRQRSARDER EVHLSLTRQG QALREQVGPL
KARLLCDSGV DLDRLNDLRS GLDHLLGQIK ALS