Gene Pfl01_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3974 
Symbol 
ID3717433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4498952 
End bp4499578 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content50% 
IMG OID 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_349702 
Protein GI77460195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCG TTTTTATTGT CGACGATCAC CCGGTCATCC GCCTTGCCGT TCGAATGCTG 
CTGGAACATG AAGGTTATAA AGTCGTTGGA GAAACCGATA ACGGTGTCGA TGCCATGCAG
ATGGTTCGCG AATGCATGCC CGACCTGATC ATTCTCGACA TCAGCATTCC CAAGCTCGAT
GGCCTGGAAG TCCTGGCCCG CTTCAACGCC ATGAGTTCGC CCTTCAAGAC GCTGGTATTG
ACTGCGCAAT GCCCGACCTT GTTCGGCATT CGTTGCATGC AGTCAGGTGC ATCGGGTTAT
GTCTGCAAAC AGGAAGACCT GAGCGAACTG GTCAGTGCGA TCAAGGCTGT CCTTTCCGGC
TACAACTATT TTCCCAGCCA GGCCTTGAAC CCTGTTCGTC ACGATGACGT GCGTTATGCA
GAACTGGAAC TCTTCAAATC CGTCAATGAC CGGGAACTTA TGGTCTTGCA ACTCTTTGCC
CAGGGCCGCA CGAACAAGGA AATTGCAAAA GGCATGTTTC TCAGTAACAA AACTGTAAGC
ACTTATAAAA AACGACTGAT GCAAAAACTC AAAGCCAAGT CTCTCGTAGA ACTTATCGAA
ATGGCCAAAC GTAACGCACT CGTGTGA
 
Protein sequence
MNSVFIVDDH PVIRLAVRML LEHEGYKVVG ETDNGVDAMQ MVRECMPDLI ILDISIPKLD 
GLEVLARFNA MSSPFKTLVL TAQCPTLFGI RCMQSGASGY VCKQEDLSEL VSAIKAVLSG
YNYFPSQALN PVRHDDVRYA ELELFKSVND RELMVLQLFA QGRTNKEIAK GMFLSNKTVS
TYKKRLMQKL KAKSLVELIE MAKRNALV