Gene Pfl01_3945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3945 
Symbol 
ID3715249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4471185 
End bp4472975 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349673 
Protein GI77460166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCA CGGTTCGCAT CGGATGCGCC AGCGCATTCT GGGGAGACAC TTCGACCGCC 
GCTGCGCAGC TCGTGGCCGG GGGACAGCTG GATTATCTGG TCTTCGACTA CCTGGCCGAA
ATAACCATGT CGATCATGGC AGGCGCGCGC ATGAAGGATC CGCAGGCCGG ATTTGCCGCC
GACTTCATCG AAGTCCTCAC GCCCCTGCTG CCGCTATTGG CCGAACAGAA CATTCGCGTC
ATCAGCAATG CCGGCGGGGT CAATCCCAAG GCCTGCGCGG CCGCCCTGCA AGCGGCCTGC
GACAAGGCTG GCGTAGCACT GAAAATCGCC GTGCTGTCGG GCGATGACCT GCAACCCCAG
TTCAAACACC TCGCCTCCCA AGGCATTACG GAAATGTTCA GCGGCGCCCC GCTGCCGCCG
ATGTGCGTGT CGACCAACGC CTACCTCGGC GCGCCGGGCA TCGTCGAAGC CCTGCGCCTG
GGTGCCGACA TCGTGATCAC CGGCCGGGTG GTCGACAGCG CGGTGGTCAG CGCCGCGCTG
GTGCATGAAT TCGGCTGGTC GTGGCATGAC TACGACAAAC TCGCGCAAGC CGCCCTGGCC
GGGCACATCA TCGAATGTGG CGCGCAATGC ACCGGCGGTA ATTTCACCGA CTGGCGCGAC
GTGCCGGATT ACGAGCACAT CGGCTTTCCG ATCGTCGAAG TCAACGCCGA CGGCCAGTTC
ATCGTCAGCA AACCCGAAGG CTCCGGCGGG CTGGTCACGC CGCTGACCGT CGGCGAGCAG
ATGCTCTACG AAATCGGTGA TCCGCAGGCC TATCTGTTGC CCGATGTGGT CTGCGATTTC
AGCCAGGTCA AACTCCAGCA ACAAGGCAAA AACGCCGTCC GGGTCCACGG CGCCAAAGGC
TTGCCGCCCA GCGACCAATA CAAGGTCAGC GCCACGTATC CGGATGGTTT CCGCTGCACC
GCCAGTTGCC TGATCGCCGG CATCGATGCC GTGGAAAAAG CCCGGCGCGT CAGTCGGGCG
ATCCTCGACA AGACTTCGGA AATGCTCGAA CAAAAAGGCT TGGGACCGTA CACCGAAACC
GATGTCGAAC TGCTCGGCAG CGAAGCCACC TACGGCCCTC ACGGCCAGCG CCGGGACAGC
CGCGAAGTGG TGATCAAACT CGCCGTGCGC CACCCGAACA AACAGGCGCT GATCTTGTTC
TCCCGCGAGA TAGCCCAGGC CGCCACCGGC ATGGCGCCGG GCCTGACCGG CATCGTCGGC
GGGCGGCCGA CGGTGTATCC GCTGATCCGG CTGTTCTCGT TCCTGATCGA CAAAAGCGCC
TGCACCTTGC AGATCGACAT CGCCGGCGAA TCTCACCCGT TCACCCTGCC CGCCCCCGCC
ACCCTCGACA GTCAGGATCT GCCCCTGCCC CACGAAACGC CTAAACCCCA GGGCCGCGCC
GACGCGAGTG TGCCGCTGGT GAAACTGGCC GTGGCGCGTT CCGGCGACAA GGGCAATCAC
AGCAACATCG GCGTCCTGCC GCGTCGTCCG GAATACCTAC CGTGGATCGT CGAAGCGCTG
ACCCCGGCGG TGGTCGTCGA TTGGATGAAC CATGTCCTCG ACCCGATTCA CGGCCGGGTC
GAACGCTGGT ATCTGCCCGG CACCCACAGC CTCAACTTCC TGCTGGAAAA CGCCCTTGGT
GGCGGCGGCG TGGCGAGCCT GCGCATCGAC CCGCAAGGCA AGGCTTTCGC CCAGCAATTA
CTGGAAATCC AGATCCCGGT GCCGCAAAGC ATCGCCGAAC AGTTCGACTA G
 
Protein sequence
MPTTVRIGCA SAFWGDTSTA AAQLVAGGQL DYLVFDYLAE ITMSIMAGAR MKDPQAGFAA 
DFIEVLTPLL PLLAEQNIRV ISNAGGVNPK ACAAALQAAC DKAGVALKIA VLSGDDLQPQ
FKHLASQGIT EMFSGAPLPP MCVSTNAYLG APGIVEALRL GADIVITGRV VDSAVVSAAL
VHEFGWSWHD YDKLAQAALA GHIIECGAQC TGGNFTDWRD VPDYEHIGFP IVEVNADGQF
IVSKPEGSGG LVTPLTVGEQ MLYEIGDPQA YLLPDVVCDF SQVKLQQQGK NAVRVHGAKG
LPPSDQYKVS ATYPDGFRCT ASCLIAGIDA VEKARRVSRA ILDKTSEMLE QKGLGPYTET
DVELLGSEAT YGPHGQRRDS REVVIKLAVR HPNKQALILF SREIAQAATG MAPGLTGIVG
GRPTVYPLIR LFSFLIDKSA CTLQIDIAGE SHPFTLPAPA TLDSQDLPLP HETPKPQGRA
DASVPLVKLA VARSGDKGNH SNIGVLPRRP EYLPWIVEAL TPAVVVDWMN HVLDPIHGRV
ERWYLPGTHS LNFLLENALG GGGVASLRID PQGKAFAQQL LEIQIPVPQS IAEQFD