Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3945 |
Symbol | |
ID | 3715249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4471185 |
End bp | 4472975 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_349673 |
Protein GI | 77460166 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCA CGGTTCGCAT CGGATGCGCC AGCGCATTCT GGGGAGACAC TTCGACCGCC GCTGCGCAGC TCGTGGCCGG GGGACAGCTG GATTATCTGG TCTTCGACTA CCTGGCCGAA ATAACCATGT CGATCATGGC AGGCGCGCGC ATGAAGGATC CGCAGGCCGG ATTTGCCGCC GACTTCATCG AAGTCCTCAC GCCCCTGCTG CCGCTATTGG CCGAACAGAA CATTCGCGTC ATCAGCAATG CCGGCGGGGT CAATCCCAAG GCCTGCGCGG CCGCCCTGCA AGCGGCCTGC GACAAGGCTG GCGTAGCACT GAAAATCGCC GTGCTGTCGG GCGATGACCT GCAACCCCAG TTCAAACACC TCGCCTCCCA AGGCATTACG GAAATGTTCA GCGGCGCCCC GCTGCCGCCG ATGTGCGTGT CGACCAACGC CTACCTCGGC GCGCCGGGCA TCGTCGAAGC CCTGCGCCTG GGTGCCGACA TCGTGATCAC CGGCCGGGTG GTCGACAGCG CGGTGGTCAG CGCCGCGCTG GTGCATGAAT TCGGCTGGTC GTGGCATGAC TACGACAAAC TCGCGCAAGC CGCCCTGGCC GGGCACATCA TCGAATGTGG CGCGCAATGC ACCGGCGGTA ATTTCACCGA CTGGCGCGAC GTGCCGGATT ACGAGCACAT CGGCTTTCCG ATCGTCGAAG TCAACGCCGA CGGCCAGTTC ATCGTCAGCA AACCCGAAGG CTCCGGCGGG CTGGTCACGC CGCTGACCGT CGGCGAGCAG ATGCTCTACG AAATCGGTGA TCCGCAGGCC TATCTGTTGC CCGATGTGGT CTGCGATTTC AGCCAGGTCA AACTCCAGCA ACAAGGCAAA AACGCCGTCC GGGTCCACGG CGCCAAAGGC TTGCCGCCCA GCGACCAATA CAAGGTCAGC GCCACGTATC CGGATGGTTT CCGCTGCACC GCCAGTTGCC TGATCGCCGG CATCGATGCC GTGGAAAAAG CCCGGCGCGT CAGTCGGGCG ATCCTCGACA AGACTTCGGA AATGCTCGAA CAAAAAGGCT TGGGACCGTA CACCGAAACC GATGTCGAAC TGCTCGGCAG CGAAGCCACC TACGGCCCTC ACGGCCAGCG CCGGGACAGC CGCGAAGTGG TGATCAAACT CGCCGTGCGC CACCCGAACA AACAGGCGCT GATCTTGTTC TCCCGCGAGA TAGCCCAGGC CGCCACCGGC ATGGCGCCGG GCCTGACCGG CATCGTCGGC GGGCGGCCGA CGGTGTATCC GCTGATCCGG CTGTTCTCGT TCCTGATCGA CAAAAGCGCC TGCACCTTGC AGATCGACAT CGCCGGCGAA TCTCACCCGT TCACCCTGCC CGCCCCCGCC ACCCTCGACA GTCAGGATCT GCCCCTGCCC CACGAAACGC CTAAACCCCA GGGCCGCGCC GACGCGAGTG TGCCGCTGGT GAAACTGGCC GTGGCGCGTT CCGGCGACAA GGGCAATCAC AGCAACATCG GCGTCCTGCC GCGTCGTCCG GAATACCTAC CGTGGATCGT CGAAGCGCTG ACCCCGGCGG TGGTCGTCGA TTGGATGAAC CATGTCCTCG ACCCGATTCA CGGCCGGGTC GAACGCTGGT ATCTGCCCGG CACCCACAGC CTCAACTTCC TGCTGGAAAA CGCCCTTGGT GGCGGCGGCG TGGCGAGCCT GCGCATCGAC CCGCAAGGCA AGGCTTTCGC CCAGCAATTA CTGGAAATCC AGATCCCGGT GCCGCAAAGC ATCGCCGAAC AGTTCGACTA G
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Protein sequence | MPTTVRIGCA SAFWGDTSTA AAQLVAGGQL DYLVFDYLAE ITMSIMAGAR MKDPQAGFAA DFIEVLTPLL PLLAEQNIRV ISNAGGVNPK ACAAALQAAC DKAGVALKIA VLSGDDLQPQ FKHLASQGIT EMFSGAPLPP MCVSTNAYLG APGIVEALRL GADIVITGRV VDSAVVSAAL VHEFGWSWHD YDKLAQAALA GHIIECGAQC TGGNFTDWRD VPDYEHIGFP IVEVNADGQF IVSKPEGSGG LVTPLTVGEQ MLYEIGDPQA YLLPDVVCDF SQVKLQQQGK NAVRVHGAKG LPPSDQYKVS ATYPDGFRCT ASCLIAGIDA VEKARRVSRA ILDKTSEMLE QKGLGPYTET DVELLGSEAT YGPHGQRRDS REVVIKLAVR HPNKQALILF SREIAQAATG MAPGLTGIVG GRPTVYPLIR LFSFLIDKSA CTLQIDIAGE SHPFTLPAPA TLDSQDLPLP HETPKPQGRA DASVPLVKLA VARSGDKGNH SNIGVLPRRP EYLPWIVEAL TPAVVVDWMN HVLDPIHGRV ERWYLPGTHS LNFLLENALG GGGVASLRID PQGKAFAQQL LEIQIPVPQS IAEQFD
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