Gene Pfl01_3911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3911 
Symbol 
ID3712273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4427762 
End bp4429570 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content62% 
IMG OID 
Productpeptidase M24 
Protein accessionYP_349639 
Protein GI77460132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.102431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCC AGACCTTTAC CGAAGGAACG GTTCCCCAGC GCCTCGCGCA CACCCGTGAA 
CTGATGCGTC GCGAAGGTAT CCACGCGTTG CTGGTGCCGT CCGCCGACCC GCACCTGTCG
GAATACCTGC CGGGTTACTG GCAGGGTCGG CAATGGCTGT CGGGTTTCCA TGGCTCGGTC
GGCACGTTGA TTGTCACCAC AGACTTCGCC GGGGTCTGGG CCGACAGCCG TTACTGGGAA
CAGGCGACCA AGGAACTCAA GGGCAGCGGC ATCGAGCTGG TGAAACTGCA ACCGGGTCAG
CCGAGCCCGC TGGACTGGCT GGCCGAGCAG ACGCCGGAAG GTGGCGTGGT TGCGGTTGAC
GGTGCGGTGA TGGCCGTTGC GTCGGCGCGC ACGCTGGGCA GCAAGCTCGA AGCCCGGGGC
GCCAGTCTGC GTACCGACAT CGACTTGTTG AAAGAAGTCT GGAGCGATCG CCCGGCGCTG
CCGAATGCGC CGATCTACCA GCACCTGCCA CCGCAGGCGA CTGTCAGCCG TGGCGAGAAA
ATCGCGAAAC TGCGCGAAAC CCTGCAGGAA CGCGGTGCCG ACTGGCACTT CATCGCCACC
CTCGACGACA TCGCCTGGCT GTTCAACCTG CGCGGCGGCG ATGTGTCGTT CAACCCGGTG
TTCGTTTCCT TCGCGCTGAT CAGCCAGCAC CAAGCCACGC TGTTTGTGGC CTTGAGCAAG
GTTGATGCTG AGCTGCGTGC CGTGCTGGAA AAAGACGGCG TAACCCTGCG CGACTACAGC
GAAGTCGCTG ATGCCTTGCG TGCGATTCCG AACGGCGCGA GCCTGCTGGT GGATCCGGCG
CGGGTTACCA GCGGTCTGTT GGATAACCTC GACACTGGCG TGAAACTGGT CGAAGGCCTG
AACCCGACCA CACTGGCCAA GTCGCAGAAG AGTCTTGCAG ACGCCGGCCA CATCCGTCAG
GCGATGGAGC AGGATGGCGC GGCGCTTTGC GAGTTTTTCA CCTGGCTGGA ATCGGCCTGG
GGGCGCGAGC GCATCACCGA ACTGACCATC GACGAAAAGC TCACGGCGGC CCGTGAGCGT
CGTCCGGATT ATGTGTCGCT GAGTTTCAAC ACCATCGCTG CGTTCAACGC CAACGGCGCG
ATGCCGCATT ACCACGCCAC CCCGGAAGAA CACGCGGTGA TCGAGGGTGA TGGCCTGCTG
CTGATCGATT CGGGCGGCCA ATACTTGGGC GGCACCACTG ACATCACGCG CATGGTGGCA
GTTGGTACGC CAACGGATGA GCAGAAGCGC GATTGCACTC GTGTGTTGAA AGGCGTTATT
GCTTTGTCCC GCGCGCATTT CCCGAAAGGC ATTCTGTCGC CGCTGCTGGA CGCCATCGCT
CGTGCGCCGA TCTGGGCTGA GAACGTGGAT TACGGCCATG GCACCGGACA CGGCGTGGGT
TACTTCCTCA ATGTTCACGA AGGTCCGCAG GTGATCGCTT ATCAGGCAGC GCCGGCGCCA
CAAACCGCCA TGCAACCGGG AATGATCACC TCCATCGAAC CGGGCACTTA TCGTCCGGGC
CGCTGGGGTG TGCGGATCGA GAACCTGGCG ATGAACGTAT TGGCTGGAAG CAGCGAATTC
GGCGAGTTCC TCAAGTTCGA AACCCTGACC CTGTGCCCGA TCGACACCCG TTGCCTGGAA
CCGTCGTTGC TGACGCAGGA AGAGAAACAA TGGTTCAACG CCTATCACGC CGAAGTGCGC
GAGCGCCTGA GTCCGCTGCT CGATGGCGCG GCACTGGAAT GGCTGAACAC GCGTACTGCC
GCTATCTGA
 
Protein sequence
MSTQTFTEGT VPQRLAHTRE LMRREGIHAL LVPSADPHLS EYLPGYWQGR QWLSGFHGSV 
GTLIVTTDFA GVWADSRYWE QATKELKGSG IELVKLQPGQ PSPLDWLAEQ TPEGGVVAVD
GAVMAVASAR TLGSKLEARG ASLRTDIDLL KEVWSDRPAL PNAPIYQHLP PQATVSRGEK
IAKLRETLQE RGADWHFIAT LDDIAWLFNL RGGDVSFNPV FVSFALISQH QATLFVALSK
VDAELRAVLE KDGVTLRDYS EVADALRAIP NGASLLVDPA RVTSGLLDNL DTGVKLVEGL
NPTTLAKSQK SLADAGHIRQ AMEQDGAALC EFFTWLESAW GRERITELTI DEKLTAARER
RPDYVSLSFN TIAAFNANGA MPHYHATPEE HAVIEGDGLL LIDSGGQYLG GTTDITRMVA
VGTPTDEQKR DCTRVLKGVI ALSRAHFPKG ILSPLLDAIA RAPIWAENVD YGHGTGHGVG
YFLNVHEGPQ VIAYQAAPAP QTAMQPGMIT SIEPGTYRPG RWGVRIENLA MNVLAGSSEF
GEFLKFETLT LCPIDTRCLE PSLLTQEEKQ WFNAYHAEVR ERLSPLLDGA ALEWLNTRTA
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