Gene Pfl01_3906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3906 
Symbol 
ID3712268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4423739 
End bp4424308 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content58% 
IMG OID 
ProductTetR family transcriptional regulator 
Protein accessionYP_349634 
Protein GI77460127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0242743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTACT CCGCCGGTCA CAAGCTGGAA ACCAAAGAAA AGCTCCTGCA AAGCAGTTCG 
CTTTCTGCGA AAAGAAGCGG GTTCTCATCA ATGGGTGTCG ATGGCCTGAT GAAGGCGATC
GGTCTGAGTG GGGCGGCGTT CTACAGTCAC TTCTCGTCCA AGGACGCGTT GTTTGCGGCG
ATCGTCGAGC GGGAGTTGTG CCAGAGTCTG GAACGCTTGG GCGGGCAGGG TACACAGGAT
CACGAACGGC TGGAGCGGTG CCTGAAACTG TATTTGAACA TGGACCATGT CGAGCAGCCT
GAACTGGGCT GCGCATTGCC TGCGCTGGGC GCCGAGATAG CGAGGTCGGA TATTGTTGTG
CGGGAGCAGG CCGAGCTGTG GATTTGTAAG CTTCAGGAAA GTTGGGCGCA GATTCTGGAA
AGCGACAGCC TGGCTTGGGC CATTCTGTCG CAATGTGTCG GGGCACTGGT GGTGGCGCGT
ATGTTGGCGT CGCCCAAGAT TCAGCAGCGT GTGCTGAAGT CCTGTCATGA AGAGATCGGG
AACCAGCTCG CCGCTTCGCG AGTGCAGTAG
 
Protein sequence
MRYSAGHKLE TKEKLLQSSS LSAKRSGFSS MGVDGLMKAI GLSGAAFYSH FSSKDALFAA 
IVERELCQSL ERLGGQGTQD HERLERCLKL YLNMDHVEQP ELGCALPALG AEIARSDIVV
REQAELWICK LQESWAQILE SDSLAWAILS QCVGALVVAR MLASPKIQQR VLKSCHEEIG
NQLAASRVQ