Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3906 |
Symbol | |
ID | 3712268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4423739 |
End bp | 4424308 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | TetR family transcriptional regulator |
Protein accession | YP_349634 |
Protein GI | 77460127 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0242743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTACT CCGCCGGTCA CAAGCTGGAA ACCAAAGAAA AGCTCCTGCA AAGCAGTTCG CTTTCTGCGA AAAGAAGCGG GTTCTCATCA ATGGGTGTCG ATGGCCTGAT GAAGGCGATC GGTCTGAGTG GGGCGGCGTT CTACAGTCAC TTCTCGTCCA AGGACGCGTT GTTTGCGGCG ATCGTCGAGC GGGAGTTGTG CCAGAGTCTG GAACGCTTGG GCGGGCAGGG TACACAGGAT CACGAACGGC TGGAGCGGTG CCTGAAACTG TATTTGAACA TGGACCATGT CGAGCAGCCT GAACTGGGCT GCGCATTGCC TGCGCTGGGC GCCGAGATAG CGAGGTCGGA TATTGTTGTG CGGGAGCAGG CCGAGCTGTG GATTTGTAAG CTTCAGGAAA GTTGGGCGCA GATTCTGGAA AGCGACAGCC TGGCTTGGGC CATTCTGTCG CAATGTGTCG GGGCACTGGT GGTGGCGCGT ATGTTGGCGT CGCCCAAGAT TCAGCAGCGT GTGCTGAAGT CCTGTCATGA AGAGATCGGG AACCAGCTCG CCGCTTCGCG AGTGCAGTAG
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Protein sequence | MRYSAGHKLE TKEKLLQSSS LSAKRSGFSS MGVDGLMKAI GLSGAAFYSH FSSKDALFAA IVERELCQSL ERLGGQGTQD HERLERCLKL YLNMDHVEQP ELGCALPALG AEIARSDIVV REQAELWICK LQESWAQILE SDSLAWAILS QCVGALVVAR MLASPKIQQR VLKSCHEEIG NQLAASRVQ
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