Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3889 |
Symbol | |
ID | 3712227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4398281 |
End bp | 4399381 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | putative RNA 2'-O-ribose methyltransferase |
Protein accession | YP_349617 |
Protein GI | 255961266 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.519018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.040112 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGCCC TCTGCCCAGG AGTAAGAATG AACACCCTAT TCATGCATTG CCGGCCAGGC TTCGAAGGCG AAGTCTGCTC GGAGATTTCC GACCTCGCCG CCCGACTGAA TGTGGCCGGC TACGCCAAGG CCAAACCGGC CACCGCTTGC GCCGAGTTCG TCTGCACCGA AGAAGACGGT GCCGAGCGCC TGATGCGCGG TCAGCGTTTC GCCGAGCTGA TCTTCCCGCG CCAATGGGCG CGCGGGTTTT TCATCGATCT GCCGGAAAAC GACCGTATCA GCGTGATCCT CGCTCACATG AGTGAATTCC CGGTGTGCGG CAGCCTGTGG CTGGAAGTCG TCGACACCAA CGACGGCAAG GAGCTGTCGA ACTTCTGCAA GAAATTCGAA GGCCCGCTGC GCAAGGCCCT GACCGGTGCC GGCAAACTGG TGGAGGACAC CAGCAAGCCG CGTCTGCTGC TGACCTTCAA GAGCGGCCGT GAGGTGTTTC TCGGTCTGGC CGACGCCGGT AACTCGGCGA TGTGGCCGAT GGGCATTCCG CGCCTGAAGT TCCCGCGTGA GGCGCCGAGC CGTTCGACCC TGAAACTGGA AGAAGCCTGG CACCACTTCA TCCCCCGCGA CCAGTGGGAA GATCGCCTGC ACAGCGACAT GACCGGCGTG GATCTCGGCG CGGCGCCGGG CGGCTGGACC TGGCAGCTGG TCAATCGCGG CATGCTGGTG ACTGCTATCG ACAACGGCCC GATGGCCGAA AGCCTGATGG ACACCGGTCT GGTGCAGCAC CTGATGGCTG ACGGCTTCAC CTTCAAGCCC AAGCAGCCGG TGGACTGGAT GGTTTGCGAC ATCGTCGAGA AACCGGCGCG CAATGCCGCG ATGCTCGAAG AGTGGATCGG CGAGGGGCAT TGCCGGGAAG CGGTGGTCAA CCTCAAGTTG CCGATGAAGC AGCGTTACGC CGAAGTGAAG CGCCTGCTCG AACGCATCGC CGATGGTTTC AAGGCCCGTG GGATCAAGGT CGACATCGGC TGCAAGCAGC TTTACCACGA CCGCGAGGAA GTGACCTGCC ATTTGCGCCG CCTTGACGTG AAGAAAGCCA AAGCCCGCTG A
|
Protein sequence | MIALCPGVRM NTLFMHCRPG FEGEVCSEIS DLAARLNVAG YAKAKPATAC AEFVCTEEDG AERLMRGQRF AELIFPRQWA RGFFIDLPEN DRISVILAHM SEFPVCGSLW LEVVDTNDGK ELSNFCKKFE GPLRKALTGA GKLVEDTSKP RLLLTFKSGR EVFLGLADAG NSAMWPMGIP RLKFPREAPS RSTLKLEEAW HHFIPRDQWE DRLHSDMTGV DLGAAPGGWT WQLVNRGMLV TAIDNGPMAE SLMDTGLVQH LMADGFTFKP KQPVDWMVCD IVEKPARNAA MLEEWIGEGH CREAVVNLKL PMKQRYAEVK RLLERIADGF KARGIKVDIG CKQLYHDREE VTCHLRRLDV KKAKAR
|
| |