Gene Pfl01_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3889 
Symbol 
ID3712227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4398281 
End bp4399381 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content62% 
IMG OID 
Productputative RNA 2'-O-ribose methyltransferase 
Protein accessionYP_349617 
Protein GI255961266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.519018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.040112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCC TCTGCCCAGG AGTAAGAATG AACACCCTAT TCATGCATTG CCGGCCAGGC 
TTCGAAGGCG AAGTCTGCTC GGAGATTTCC GACCTCGCCG CCCGACTGAA TGTGGCCGGC
TACGCCAAGG CCAAACCGGC CACCGCTTGC GCCGAGTTCG TCTGCACCGA AGAAGACGGT
GCCGAGCGCC TGATGCGCGG TCAGCGTTTC GCCGAGCTGA TCTTCCCGCG CCAATGGGCG
CGCGGGTTTT TCATCGATCT GCCGGAAAAC GACCGTATCA GCGTGATCCT CGCTCACATG
AGTGAATTCC CGGTGTGCGG CAGCCTGTGG CTGGAAGTCG TCGACACCAA CGACGGCAAG
GAGCTGTCGA ACTTCTGCAA GAAATTCGAA GGCCCGCTGC GCAAGGCCCT GACCGGTGCC
GGCAAACTGG TGGAGGACAC CAGCAAGCCG CGTCTGCTGC TGACCTTCAA GAGCGGCCGT
GAGGTGTTTC TCGGTCTGGC CGACGCCGGT AACTCGGCGA TGTGGCCGAT GGGCATTCCG
CGCCTGAAGT TCCCGCGTGA GGCGCCGAGC CGTTCGACCC TGAAACTGGA AGAAGCCTGG
CACCACTTCA TCCCCCGCGA CCAGTGGGAA GATCGCCTGC ACAGCGACAT GACCGGCGTG
GATCTCGGCG CGGCGCCGGG CGGCTGGACC TGGCAGCTGG TCAATCGCGG CATGCTGGTG
ACTGCTATCG ACAACGGCCC GATGGCCGAA AGCCTGATGG ACACCGGTCT GGTGCAGCAC
CTGATGGCTG ACGGCTTCAC CTTCAAGCCC AAGCAGCCGG TGGACTGGAT GGTTTGCGAC
ATCGTCGAGA AACCGGCGCG CAATGCCGCG ATGCTCGAAG AGTGGATCGG CGAGGGGCAT
TGCCGGGAAG CGGTGGTCAA CCTCAAGTTG CCGATGAAGC AGCGTTACGC CGAAGTGAAG
CGCCTGCTCG AACGCATCGC CGATGGTTTC AAGGCCCGTG GGATCAAGGT CGACATCGGC
TGCAAGCAGC TTTACCACGA CCGCGAGGAA GTGACCTGCC ATTTGCGCCG CCTTGACGTG
AAGAAAGCCA AAGCCCGCTG A
 
Protein sequence
MIALCPGVRM NTLFMHCRPG FEGEVCSEIS DLAARLNVAG YAKAKPATAC AEFVCTEEDG 
AERLMRGQRF AELIFPRQWA RGFFIDLPEN DRISVILAHM SEFPVCGSLW LEVVDTNDGK
ELSNFCKKFE GPLRKALTGA GKLVEDTSKP RLLLTFKSGR EVFLGLADAG NSAMWPMGIP
RLKFPREAPS RSTLKLEEAW HHFIPRDQWE DRLHSDMTGV DLGAAPGGWT WQLVNRGMLV
TAIDNGPMAE SLMDTGLVQH LMADGFTFKP KQPVDWMVCD IVEKPARNAA MLEEWIGEGH
CREAVVNLKL PMKQRYAEVK RLLERIADGF KARGIKVDIG CKQLYHDREE VTCHLRRLDV
KKAKAR