Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3887 |
Symbol | |
ID | 3712533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4396513 |
End bp | 4397913 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | multi anti extrusion protein MatE |
Protein accession | YP_349615 |
Protein GI | 77460108 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0845713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGACC GCCCTGCTGC CGTTTCCCTC AACCGCCCTG CCCGGGTTCG CCTGGAGCTG AAGAATCTGC TCGGCCTGGC CCTGCCGATC ATGATCGCGC AGCTGGCAAC CACCGCCATG GGCTTCGTCG ATGCGGTGAT GGCCGGGCGC GTCGGGCCCA AGGATCTGGC GGCCGTGGCG CTGGGCAACT CGATCTGGGT GCCGGTGTTC CTGCTGATGA CCGGCACTTT GCTGGCGACC ACGCCTAAAG TCGCCCAGCG CTTTGGCGCC GGCACCCACA GCGAGATCGG CCCGATCGTG CGTCAGGCCC TGTGGCTGGC ACTGGTGGTG GGCCTGATGG CGACCACCAT GCTGTTCAGC GCCGAACCGA TCCTGCATTT GATGAAAGTC GATCCGGAGC TGATCGGCCC ATGCATGCAG TACCTGCACG GCATCGCCAG CGGTCTGCCG GCCGTGGCGT TCTACCATGT GCTGCGCTGC ACCAGTGACG GCCTCGGTCG CACCCGCCCG GCGATGGTGC TGGGCCTGTG CGGCCTGGCG CTGAACATTC CGCTCAACTA CGTGTTCATT TATGGCCACT TTGGCGTACC GGCCATGGGC GGCGTCGGTT GCGGCTGGGC CACGGCGATC GTGATGTGGG TGATGGCACT GGGTCTGGCC GGTTATGAGC GCTGGGCACC GGCCTACAAG TCGAGCGAAC TGTTCAGCCG TTTCGACTGG CCGCAATGGG CGGTGATCAA GCGTTTGCTG GCTATCGGTC TGCCGATCGG CGTCGCGGTG TTTGCCGAGT CGAGCATCTT CGCGGTGATC GCGCTGCTGA TCGGCAGCCT CGGCGCCACC GTGGTGGCCG GGCACCAGAT CGCGCTGAAC GTCAGCTCGC TGGTGTTCAT GATTCCGTAC TCGCTGGGCA TGGCCGTGAC CGTGCGGGTC GGTCAGGCCC TGGGCCGTGA AGAACCTCGC GAAGCACGTT TCGCGGCGGG TGTCGGCATG GGCACTGCGC TGGCTTACGC CTGCCTGTCG GCGAGCATGA TGCTGCTGAT GCGCGAGCAC ATTGCGGCGA TCTACACGTC GGATCCGATG GTGATTCACA TCGCCGCGAT GCTGATCGTG TATTCGGCGC TGTTCCAGTT TTCCGACGCG ATTCAGGTCA CCGCCGCCGG CGCCCTGCGC GGTTATCAGG ACACTCGCGT GACGATGATT CTGACCCTGT TCGCCTATTG GGGCATCGGC CTGCCGGTGG GTTACGCCCT CGGCCTGACC GACTGGCTCG GCGAGCCACG CGGCCCGAGC GGCTTGTGGG AAGGCCTGAT CGTCGGCCTG AGCTGCGCGG CGCTGATGCT GTCGATCCGC CTGACGCGCA GTGCACGCAA ACGCATTCGC ATCAGCCGTT CGATGGGCTG A
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Protein sequence | MTDRPAAVSL NRPARVRLEL KNLLGLALPI MIAQLATTAM GFVDAVMAGR VGPKDLAAVA LGNSIWVPVF LLMTGTLLAT TPKVAQRFGA GTHSEIGPIV RQALWLALVV GLMATTMLFS AEPILHLMKV DPELIGPCMQ YLHGIASGLP AVAFYHVLRC TSDGLGRTRP AMVLGLCGLA LNIPLNYVFI YGHFGVPAMG GVGCGWATAI VMWVMALGLA GYERWAPAYK SSELFSRFDW PQWAVIKRLL AIGLPIGVAV FAESSIFAVI ALLIGSLGAT VVAGHQIALN VSSLVFMIPY SLGMAVTVRV GQALGREEPR EARFAAGVGM GTALAYACLS ASMMLLMREH IAAIYTSDPM VIHIAAMLIV YSALFQFSDA IQVTAAGALR GYQDTRVTMI LTLFAYWGIG LPVGYALGLT DWLGEPRGPS GLWEGLIVGL SCAALMLSIR LTRSARKRIR ISRSMG
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